KEGG   Medicago truncatula (barrel medic): 11434892
Entry
11434892          CDS       T01716                                 
Name
(RefSeq) CDK-activating kinase assembly factor MAT1 isoform X1
  KO
K10842  CDK-activating kinase assembly factor MAT1
Organism
mtr  Medicago truncatula (barrel medic)
Pathway
mtr03022  Basal transcription factors
mtr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    11434892
  09124 Replication and repair
   03420 Nucleotide excision repair
    11434892
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mtr03021]
    11434892
   03400 DNA repair and recombination proteins [BR:mtr03400]
    11434892
Transcription machinery [BR:mtr03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     11434892
DNA repair and recombination proteins [BR:mtr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     11434892
SSDB
Motif
Pfam: MAT1 NAD_binding_9
Other DBs
NCBI-GeneID: 11434892
NCBI-ProteinID: XP_003618273
UniProt: G7KI90
LinkDB
Position
6:1293760..1299557
AA seq 185 aa
MVISSTNPHYKEIAIRKRIASIFNKREDDFPSLKEYNDYLEEVEDMTFNLIEGIDVAAIE
ARIAKYQEENSEQIMINRARKAEELAAAMATSKGQPAQTDNDDANPNSQAGFGAVPQGQY
APTIAGGQPRPTGMGPQPLPLGGGDAGYVVENEETLRRQARAGGWSIEISRKRALEEAFG
SIWIS
NT seq 558 nt   +upstreamnt  +downstreamnt
atggtgatctctagtaccaatccccactataaggagatagccatcaggaagagaatcgct
agcatattcaataaacgggaagatgattttccatctttgaaagagtacaatgattacttg
gaggaagtagaggacatgacgtttaacttgattgaaggaatagatgtagctgctattgaa
gctaggattgctaaataccaggaagaaaattctgaacaaataatgattaatcgagcccga
aaggctgaggaattagctgcagctatggcaacaagcaagggacaacctgcccaaactgat
aatgatgatgcaaacccaaattctcaagcagggtttggtgctgttcctcaagggcaatat
gcacctacaattgcaggaggacagcctagacccacaggcatgggaccacaacctttaccg
cttggtggaggtgacgcgggctacgtagttgagaacgaggaaacattgcggcgacaagca
agggctggaggatggagtatagaaataagcaggaagagggcacttgaagaagcctttgga
agcatttggatttcttag

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