Medicago truncatula (barrel medic): 11435091
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Entry
11435091 CDS
T01716
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mtr03009
]
11435091
Ribosome biogenesis [BR:
mtr03009
]
Eukaryotic type
90S particles
Other 90S particles
11435091
Pre-60S particles
Other pre-60S particles
11435091
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_RRP12_N
RRP12_HEAT
Motif
Other DBs
NCBI-GeneID:
11435091
NCBI-ProteinID:
XP_003590720
UniProt:
G7I2N3
LinkDB
All DBs
Position
1:complement(36305835..36318549)
Genome browser
AA seq
1294 aa
AA seq
DB search
MEGIEMEESTFNNESNDDICNSILSRFSNSTAVNHQHLCAVIGAMSQELKDHNLSSSPVA
YFCATCSSLDRTASEPNPPIHLMDALLTFLSIVMFKVPVAVLKEKREFLSELVTKVVMLP
SSSESAVVHGLKCVSHLLIHRDSVHWSDVSTLFNFLLGFLTDSRLKVRRQSHLCLRNVLI
NFQNSSLLASASEGVKNLLESFLLLAGGANANDDDGTKGANANDGDGTKGAQLVLYILDA
LKECLPFLSLKYKTNILNHFKTLLNMGQPLVTRRIMDGLNFLSLNPTSEVSPEALLEVLC
TLSSLSASSTEISGDGMTFIARLLDAGMKRVFSLNRQMCVVKLPSVFNDLKDILASEHEE
AILAATEALKSMINCCIDESLIKQGVDQITLDESRMSGPTIIEKICVTVESLLDYHYAAA
WDRVFEVVSSMFHKLGSNSPYFMRGILKNMEDMQQLPDENFPFRKQLHACLGSALVAMGP
ETFLSLITLNLEAEDLSVSNKWLFPILKQYIVGARLKYFTEEILPMIERAREKAQKLEKQ
ELMKADTLVYSLWSLLPSFCNYPSDTAKSFKDLEKHLRSKLKEEPNIRGIICTSLQLLIR
QNKNIKDSNDKDDSRQDMDKQQVLYNYSQQVATKNLRALEISANNLLKDLSDAFLKSTKD
DGGCLQGTIGDIASIAEKKVVQNLFKKKMSDLLKCTQNANKVDDSESSMQIDTSNDVSQS
VLRARLLDFAASLLPGLDAKDIDLLFQVIKPALQDVGVMQKKAYKVLLIMLKSSDSFVSL
KLEVLLGLMVEILPCHSSAKRHRLDCLYFLIVHVLKSEAFKDEFFYLLKSKDESMAMAWP
EVFVTEIILALKEANKKTRNRAYEILVEIAHALGDEERGGDRNNLYQFFITVARGLVGKT
PHMISATIKGLARLAYEFSDLVLTAFDLLPSTYVLLEKKNREITKANLGLLKVLVAKSQA
EGLQKHLRSVVECLFKWQDDAKNHFKAKVKLLLGMLITKCGLDAVKAVLPEDHMKLLSNI
HKIKERKERNRGAKSEESRSHVSKATTSRQSRRNHMDIFSDFDGDSAGSDTEYLNGKAIF
RGGKSSTHLKSAASSFGSKMILKNNIPEHLSDESDDEPLDLLDRQKVRSALRSENLKRKS
RSDDDEMEVDSEGRLIIREEEGEQTKKKPADSEYDARSEPDSHLSARFGTKAQKRRRTAE
PGKAGRAYTGKEYASRKAGGDIKRKDKLEPYAYWPLDRKMMSRRPQQRAAAKKGMATVVN
MTKRLEGKSASGMLSMKSMKQKKTQKKGSRQKKM
NT seq
3885 nt
NT seq
+upstream
nt +downstream
nt
atggaaggaatcgagatggaggaatcaacattcaacaacgaatccaacgatgatatatgc
aattcaattctctctcgtttctcaaactccaccgctgtaaaccaccaacacctctgtgcc
gtcatcggcgcaatgtcacaggaactcaaagatcacaacctctcttcttcacctgtcgca
tacttctgtgccacatgctcctccctggaccgcactgcatcggaacctaatccacctatc
cacctcatggacgcacttttaacatttctctcgattgttatgtttaaagttcccgttgct
gtgttgaaggagaagcgagagtttctatcggagcttgttacaaaagttgttatgttgccg
tccagttcagagagcgctgttgttcatggattgaagtgtgtttcacatttgttgattcat
agggatagtgttcattggtctgatgtatcaacattgttcaatttcttgttaggttttctt
actgattcgagactgaaggtaagaaggcaatctcatttgtgtctccgcaatgtcttgata
aattttcaaaattcttcgctattagcatctgcaagtgaaggggtcaaaaacctacttgaa
agttttctactgctggccggtggagcaaatgcaaatgatgatgatggaactaagggagca
aatgcaaatgatggtgatggaactaagggagcccaactagttttgtatattcttgatgcc
ttgaaagaatgccttcctttcttgtctctaaaatacaagaccaacattcttaaccacttc
aaaactcttttaaatatgggtcaacccctagtcacaaggcgcataatggatggtttaaat
tttctcagtcttaacccaacatcggaagtttcccctgaagcactacttgaggtgttatgc
acattatcatctctttctgcctcatcaactgagatctctggagatggtatgacatttatt
gctcgcttgcttgatgctggaatgaagagagttttttccctaaacaggcaaatgtgtgta
gttaagcttcctagtgtctttaatgacctcaaagatattttggcatctgaacatgaagag
gccatacttgcagccacagaggcactcaagagcatgatcaactgttgcattgatgaaagt
ttgattaaacagggagtggatcagataactctggatgaatcaaggatgtcaggaccaacc
attatcgagaaaatatgtgtaactgttgagagcctacttgattatcactacgctgctgcc
tgggacagagtatttgaagttgtttcctctatgtttcacaaattaggaagtaactctcct
tactttatgagaggtatactcaaaaacatggaagatatgcagcagctgcctgatgaaaat
tttccctttaggaaacagcttcatgcatgccttgggtcagctcttgttgcaatgggaccc
gaaacttttttgtcccttataacattaaatttggaagctgaagatttatctgtctcaaat
aaatggctttttccaattctaaaacagtatattgttggtgcacgtctaaaatattttaca
gaggaaattttgcctatgattgaacgtgcaagggagaaggctcaaaagcttgagaagcaa
gaactgatgaaagcagacacacttgtttactctttgtggtctttgctgccttcattttgt
aactatccttcagacacagctaaaagtttcaaggatctagaaaaacatttacgtagtaaa
ctaaaagaagaacctaatattcgtggaataatatgcactagtttgcagcttctgattaga
caaaacaagaacattaaggattcaaatgataaggatgatagtaggcaagatatggacaaa
caacaagtcttgtataattactcgcaacaggttgcaacaaaaaatttgagggcactggag
atatctgccaataatttgttgaaagatctgtcagacgcgttcctgaaatctacaaaagat
gacggtggttgtttgcagggtacaattggtgatattgcttctatagcagaaaaaaaagtt
gtacagaacttatttaagaagaaaatgtcggatctcttaaaatgcactcaaaatgccaac
aaagtagacgattcagaaagctctatgcagattgatacatcaaatgatgtgtctcaatca
gttctcagggcgcggcttcttgatttcgcagcttcattattgcctggattagatgcgaaa
gatattgatttattatttcaagtaataaagccagcattgcaggatgttggtgtcatgcag
aagaaggcatacaaagttcttttgatcatgctcaagagctcggacagttttgtttcattg
aagcttgaagttctgcttgggcttatggttgaaattcttccttgccattcttctgccaaa
cgccatagacttgattgcctttacttcttgatagtccatgtcttgaagtcagaggcattc
aaagacgagttcttttacttattaaaatcaaaggatgagtcaatggcgatggcctggcca
gaagttttcgtcactgagataatactggctcttaaggaggctaataagaaaaccaggaac
agggcttatgaaattctggtcgaaattgcccatgcactcggagacgaggagagaggtggg
gacagaaataacctctatcaattttttatcacggttgctcgcggccttgttgggaaaact
ccacatatgataagtgcaacaatcaaaggtttagctcgcttggcttatgagttctctgat
cttgttttaactgcttttgatttgcttccatccacatatgtcctgctggaaaaaaagaat
agagagattaccaaggccaatcttggtttattaaaggttttagtagccaaatcacaagca
gaaggattgcaaaagcatctgaggagcgtggttgagtgtttgtttaagtggcaagatgat
gccaaaaatcattttaaagcaaaggtcaaacttcttttgggaatgcttatcacgaagtgt
ggattggatgccgttaaagctgttctgcctgaagaccatatgaaacttctgtctaacata
cacaagatcaaggaacggaaagagaggaaccgaggtgctaaatctgaagaaagtaggtct
catgtttcaaaagcaactacatccaggcaaagtagaaggaaccatatggatattttttca
gattttgatggagacagtgccggtagtgatacagaatacctgaacggcaaggcaattttt
agagggggcaaatcttccacgcatctcaaatcagcagcatcttcatttgggtccaagatg
atactaaaaaacaatattcctgagcacttgtctgacgaatcagatgacgagccacttgat
ttgcttgatcggcagaaagtaaggtctgctcttagatctgagaatctcaaaaggaagtca
aggtcagacgatgatgagatggaggtagattctgaaggacgtttgattatccgtgaggaa
gaaggggaacaaacgaagaaaaaaccagccgattcagaatatgatgctaggagtgagcct
gatagtcatttgtctgcaaggtttggaactaaagcccagaagcggagaagaacagcagag
cctggtaaggctggtagggcttacactgggaaggaatatgctagcagaaaagctggtgga
gatattaagaggaaggataagcttgaaccttatgcttattggccacttgatcggaaaatg
atgagtcgtcggccacagcaacgggctgcggcaaaaaaaggtatggcaactgtggtaaat
atgacaaaaaggcttgaaggcaagagtgcctctggcatgctttctatgaagagtatgaaa
caaaaaaaaactcaaaagaaaggcagcaggcaaaagaaaatgtag
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