Medicago truncatula (barrel medic): 11435115
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Entry
11435115 CDS
T01716
Name
(RefSeq) probable serine/threonine protein phosphatase 2A regulatory subunit B''delta
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03015
mRNA surveillance pathway
mtr04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
11435115
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
11435115
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mtr01009
]
11435115
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtr03019
]
11435115
03036 Chromosome and associated proteins [BR:
mtr03036
]
11435115
Protein phosphatases and associated proteins [BR:
mtr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
11435115
Messenger RNA biogenesis [BR:
mtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
11435115
Chromosome and associated proteins [BR:
mtr03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
11435115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_8
EF-hand_1
EF-hand_5
DUF4187
Motif
Other DBs
NCBI-GeneID:
11435115
NCBI-ProteinID:
XP_003590953
UniProt:
G7I697
LinkDB
All DBs
Position
1:complement(39439771..39449076)
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AA seq
537 aa
AA seq
DB search
MSMEVVTDAASLDVELLQLPEFSTLSLKANLNFVEKLFEQWLSLPESNRLVTSLLNDAKS
GAPLNVPGNCSSPNAATNSLPSMFPAGTAPPLSPRSSSGSPRIVKQRAGPSNLGSPLKVV
SEPIKEVIPQFFFQHGRPPPNDLKEQCLFRTDQLFHDHSDGLQVHEFKSITKEVCKLPSF
FSTSLFRKIDNGAGVVTREAFIDYWINGNLLTMDLATQIFTILKQPQLNYLTQDDFKPVL
RELLASHPGLEFLQSTPEFQERYAETVVYRIYYYINRTGNGRMTLRELKRGNIIDAMQHA
DEEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKENLIRYGNHALTYRIVDRIFSQ
VPRKFTSKVEGKMGYEDFVYFILSEEDKSSEPSLEYWFKCIDLDANGVLTRNELQFFYEE
QLHRMECMAQEPVLFEDILCQIIDMIGPEDDSYVTLRDLKGSKLSGSVFNILFNLNKFMA
FETRDPFLIRQERENPTLTEWDRFAHREYIRLSMEEDVEDVSNGSAEVWDESLEAPF
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgagcatggaggtcgttactgatgcggcgtcgttggacgtcgaattgttgcagctacct
gagttttccactttgtccctcaaagctaatctcaattttgttgagaagcttttcgaacag
tggttgtctcttcctgaaagtaatcgattggtaacatcgttgctcaatgacgctaagtca
ggtgctcctttgaatgttcccgggaattgctctagcccaaatgctgcaactaattctttg
ccttccatgtttcctgctggaaccgctccacctctttcaccaagaagttcatccggttcc
cctcgcattgtgaaacagagagctggcccttctaatctgggttctcctttgaaagttgtc
agtgagccaattaaagaagtgatacctcagtttttctttcaacacggacggccacctcca
aatgatctaaaagaacaatgcttgtttagaactgatcagttatttcatgatcactcggat
ggactacaggtgcatgaattcaaatcaattactaaggaagtatgcaagctgccatccttt
ttttcaacttctcttttcagaaaaattgacaacggagccggtgttgtgacaagggaagca
tttattgattattggattaatggcaacctgttgacaatggatttagctactcaaatattc
acaattttaaagcaaccacagctgaattacctaactcaggatgattttaaacctgtccta
cgtgagcttttagctagtcatccgggcctggagtttctgcagagcacgcctgagtttcaa
gaaagatatgctgaaactgtagtgtacagaatctattattacattaatagaaccggaaat
ggtcgtatgactctgagggagcttaagcgtggaaatataattgatgcaatgcaacatgct
gatgaagaggaagatatcaataaggtcttgaggtacttttcgtatgagcatttttatgtt
atctactgcaagttttgggagctggatacagatcatgatttcttgatagacaaagagaat
cttatcagatatggtaaccacgcacttacctatcgaattgttgacagaatattttctcag
gtcccgagaaagtttaccagtaaggttgagggaaagatgggatatgaagattttgtttac
ttcatactgtcagaggaggacaaatcatctgaaccaagtcttgaatattggttcaagtgc
atagatttggatgcaaatggggttctgacaaggaatgaactgcaatttttttatgaggag
caattgcatcggatggagtgcatggcccaagagcctgtgctttttgaggatatcttgtgc
cagataattgacatgattggaccagaggatgatagctatgtaactctgcgtgacctgaaa
ggtagtaaactctcgggaagtgttttcaacatcctgtttaatctcaacaaattcatggca
tttgaaactcgtgacccatttttgattcgtcaggaacgtgagaatccaacattgacagag
tgggatcgatttgctcatagagaatatattaggctttcaatggaagaagatgtagaagat
gtctctaatggaagtgcagaagtctgggatgaatcactagaggctcccttttga
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