Medicago truncatula (barrel medic): 11435146 Help Entry 11435146          CDS       T01716                                  Name (RefSeq) THO complex subunit 2   KO K12879   THO complex subunit 2 Organism mtr  Medicago truncatula (barrel medic) Pathway mtr03013   Nucleocytoplasmic transport mtr03040   Spliceosome Brite KEGG Orthology (KO) [BR:mtr00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     11435146   09122 Translation    03013 Nucleocytoplasmic transport     11435146  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:mtr03019]     11435146    03041 Spliceosome [BR:mtr03041]     11435146 Messenger RNA biogenesis [BR:mtr03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      11435146 Spliceosome [BR:mtr03041]  Complex C   Other components    EJC/TREX     11435146  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     11435146 SSDB OrthologParalogGFIT Motif Pfam:  Tho2 THOC2_N Thoc2 FapA Motif Other DBs NCBI-GeneID:  11435146 NCBI-ProteinID:  XP_003626561 UniProt:  G7L429 LinkDB All DBs Position 7:complement(55454200..55479344) Genome browser AA seq 1856 aa AA seqDB search MSVAPSVQCAYVTEDRVREWSSGNANPSLNLSQPVPMLRFLYELSSTMVRGELPFPKCKV ALDSVTFSEVKASAENLASNFADIISQMAQDLTLSGEFRSRLIKLARWLVESKLVPVRLL QERCEEEFLGEAEFIKIKAQELKGKEVRVNTRLLYQQTKFNLLREESEGYAKLVTLLCRD SEALTEKGSASTMGIIKSLIGHFDLDPNRVFDIVLECFELQPDNDVFIELIPIFPKSQAS QILGFKFQYYQRMEVSNPVPYGLYRLAALLVKQDFIDLDSIYAHLLPKDEEAFEHHSTFS SKRLDEANKIGKINLAATGKDLMDDEKTGDVTVDLFAAIVMETDAIGERKSELQNSQTLG LLTGFLSADDWYHAHVLFERLSPLNPVEHIQICDTLFRFIEKSISSPYDAIRQAHVQKSG SSTGGSTDAIDVDNPSGYSSFIDLPKEIFQMLACTGPFLYRDTMLLQKVCRLLRGYYLSA LELVSHGDGALNPQFHFIGNPHLHLKEARLRVEDALGACLLPSLQLVPANPAVGQAIWEL MSLLPYEARYHLYGEWEKDDDRYPMLLAARQTAKLDTRRILKRLAKENLKQLGRMVAKLA HANPMTVLRTIVQQIEAYRHMITPVVDAFKYLTQLEYDILEYVVIERLALGGRDKLKDDG INLSDWLQSLASFWGHLCKKYPSMELRGLFQYLVNQLKRGHGIELVLLQELIQQMANVQY TENLTEEQLEAMAGSETLKCHATSFGMTRNNKALIKSTSRLRDALLPKDEPKLATPLLLL LAQHRSLVLVNADAPYIKMVSEQFDRCHGTLLQYVDFLGSAVTPGSNYAILIPSLGDLVH LYHLDPEVAFLIYRPVMRLFKSKRTPNVCWPLDDKNAASHSSANIESDPADYSGSMVLDI GSNKNPIRWSYLLDTVKTMLPSEAWNSLSPDLYATFWGLTLYDLYVPKNRYESEIAKLHA NLKSLEELSDNSSSAITKRKKEKERIQESLDRLISELHKHEKDVASVNRRLSHEKDKWLS SCPDDTLKINMEFLQRCIFPRCTFSMPDAVYCAMFVHTLHSLGTPSFNTVNHIDVLICKT LQPMICCCTEYEVGRLGRFLYETLKIAYHWKSDESIYERECGNMPGFAVYSRERNSKRVT YGQFIKELWKWSQRITQLLIQCLESSEYMDIRNALIMLTKISSVFPVTLKSGTSLEKRVA KIKSDEREDLKVLATGVAAALAARKPYWVTAEEFGMGYIVFKSAPSMTKSAAGNSAAVQS GIGLHVSQTESASGKHLDSGNTVKDQTVRTKTADDESERTESSTATKSDSGHVKLKGSSM VNELDAQSSLPSPAGQSGALKSVENPKQVQESISRAPDEHVTRIVESRTSVKRKMATVSL LKPSKQDPLKEDARSGKSVARASGSSSNDKDLQTHASDGRHTRTNVSSSVNANGYSVPGS AKGLAPSAKIAFDGSGNESKAEVGAAKSSMVKDDGNDIADFTRGSSSRLVHSPRHENTAT TKSSDKIQKRTGSVDELDRPSKRWKGDVDPRDLEGEVRFSERGKLLDPRLADDKAAPDEL GLYRAGNKSLERPKEKGNERYEREYRERLDRLDKSHGDDFIIEKPRDRSIERYGRERSIE RMQERGSERSFNRLSDKAKDDRSKLQYNDVSIEKSHTEGRFHGQNLHRASPLPPNMVPQS VGAGRRDEDADRRYGATRHSQRLSPRHEEKELRRSEETVILQDDPKRRKEDFQDQKREEM KEEEREREKSNILKEEGFNAASKRRKLTREHLPTMEPGEYLPVNPLPGIGMSQAYDGRDR RGRMIQHASYIDEPSLRIHGKELSSKLNRRESDPVYDREWDDENRQRADQKRRHRK NT seq 5571 nt NT seq  +upstreamnt  +downstreamnt atgtctgtggcaccatcggtgcagtgtgcatacgtaacagaggatcgtgttcgcgaatgg agtagtggcaatgccaacccttctctcaacctctcccaacctgttccaatgcttcgcttc ctctacgaactctcttccactatggttcgtggtgaattgccttttcccaagtgtaaagta gcattagattctgtcacattctccgaggttaaagcttccgctgagaatctagcatcaaat tttgcagatataatcagccagatggcacaagatcttacattgtccggagagtttcgttct cgtctcattaaactggcaagatggcttgtggaatccaaattggttccagttaggttactt caagaacgttgcgaggaagaatttttgggggaggctgaatttatcaaaattaaggctcag gagttgaagggaaaagaggtcagagttaatacacgacttctttatcagcaaaccaaattc aaccttctcagagaagagagtgagggctatgccaaactggtcactctactttgtcgggac tctgaagcgttgactgaaaaaggatctgcatcaacaatgggcattattaagtcattgatc ggtcattttgatttggatccaaaccgggtttttgatattgtgcttgagtgttttgaactt cagccagataatgatgtgtttatagagctgattcctatttttcctaagtctcaagcttca cagattcttggatttaaatttcaatattatcagcgcatggaagtcagtaatcctgtacca tatgggctctatagacttgcagccttgctggtgaagcaagattttatcgatcttgatagc atatatgctcatttactccccaaggatgaagaagcatttgagcatcatagcactttctct tccaagcgccttgatgaggctaataaaattggaaaaataaaccttgctgctaccggaaaa gatctaatggatgatgagaaaacgggggatgtcactgttgatctctttgctgctatagtc atggaaactgatgcaattggcgagcggaaatccgagcttcaaaacagtcaaactttgggc ttgcttactggctttctttctgcggatgactggtatcatgcacatgtactatttgaacgc ctctcaccactcaatccagtggaacatattcaaatatgtgatactttgtttaggtttatt gagaagtcaatttcttcaccatatgatgctattcgccaagcacatgttcaaaaatctgga tcgtccactggaggcagcaccgatgctattgacgtagataacccttcaggatacagttct ttcattgatcttccaaaggaaatttttcagatgcttgcttgtactggaccttttctctac cgagatactatgttgttacagaaggtttgtaggttgttgagaggttattacctttctgct ctcgagcttgttagtcatggtgacggcgcattgaatcctcaatttcattttattggaaat cctcacctacatttgaaggaagcaaggctaagggtggaggatgctttaggagcctgtcta ctaccttctctacagttggttcctgctaatccagctgttggccaggcaatttgggaacta atgagtcttcttccttatgaggcacgatatcatttatatggtgaatgggaaaaagatgat gaccgctatcctatgctgttggctgctagacaaactgccaagttggacactagacgtatt ttgaaacggctggcaaaggaaaatttgaagcagctgggtcggatggtcgcaaaattagct catgccaaccctatgactgtcctccgaacaattgttcagcagattgaggcatacagacac atgattactcctgttgtggatgcatttaagtatttgactcagcttgaatatgatatattg gaatacgttgtgattgagcgattggcacttggtggacgtgataagttaaaggatgacggg attaatttgtcagactggcttcaatctctagcttcattttggggccacctatgtaaaaag tatccatcaatggaattgcggggccttttccagtatcttgtgaaccagttaaaaagggga catggaattgagcttgttctactgcaggagcttatccaacaaatggcaaatgttcagtac acagagaatttgactgaggaacagctggaggctatggcagggagtgagactctgaaatgt catgcaacgtcttttgggatgactcggaataataaggccttgataaagtcaactagtaga cttagagatgcattacttcctaaagatgaaccaaagttggcgacccccctcttgcttctt cttgctcagcatcgttctctggttctcgtcaatgcagatgcaccttacattaaaatggtc agtgaacaatttgatagatgtcatggcactcttcttcaatatgtggattttctaggcagt gcagtcacaccaggatcaaattatgctattcttattccctcacttggtgacctggtccat ctttaccacttggaccctgaggttgctttcttgatatatcgccctgttatgagacttttc aagtctaagaggactcccaatgtttgctggcccttggatgataaaaatgctgcaagtcat tcatctgcaaacattgagtctgaccctgcagattattctggtagtatggttctagatatt ggctccaacaaaaatccaattaggtggtcatatctgctcgatactgttaaaaccatgttg ccttccgaagcgtggaatagcctatctcctgatctttatgcaacattttggggtctcacg ttatatgatttgtacgttccgaaaaaccgttatgagtcagaaatagccaagctgcatgct aatcttaaatctttggaggagctttctgacaattcaagctcagcaatcaccaagaggaag aaagaaaaggaaagaattcaagaatctcttgatcgtcttattagtgaattacataagcat gaaaaagatgtcgcatctgttaatagacggctctctcatgaaaaagacaaatggttgagt tcatgtcctgatgataccttgaagattaacatggagtttcttcagcgttgtatatttcca cgctgtactttcagtatgccagatgctgtttattgtgctatgtttgtacacacactccat tcccttggaacaccttcttttaacacagtcaaccacatagatgttcttatttgtaaaacc cttcaaccaatgatatgctgctgcactgaatatgaagttggtaggcttggcaggtttctc tatgagactttgaagattgcttaccattggaagagtgatgaatctatttatgaacgtgag tgtggaaacatgccgggatttgctgtgtattccagggaacgaaatagcaagcgagttaca tatgggcagttcattaaggaactctggaaatggagtcaaagaatcacacagttgctaatt cagtgtctggaatctagcgagtacatggatattagaaatgctcttataatgttgactaaa atttctagtgttttccctgttacattgaagagtgggacaagccttgaaaagcgggtagct aagattaaaagtgatgaaagagaggatcttaaggtgttggcaactggtgtagcagcagcg ctggctgctaggaagccttattgggttaccgctgaagaatttggtatgggttatattgtc ttcaagtctgcaccatctatgactaaatctgcggcgggaaattctgcagctgtacaaagt gggattggtcttcatgtttctcagactgaatctgccagtgggaaacatctggactctgga aacacagtcaaagaccagacagtaagaacaaaaactgcagatgacgagtcagaaagaact gaaagcagtactgcgacaaaatctgattctggccacgtaaaactcaagggtagctcaatg gtgaatgagttggatgctcaatcatctctaccctcacctgctggacaatctggggcatta aaatccgtggaaaaccctaagcaagtgcaagaatccataagtagggcaccagatgaacac gttacaagaattgttgagtcaagaacctctgtgaaacgtaaaatggctactgtttcactt ttgaagccatcaaaacaagatcctttgaaagaagatgctagatctggaaaaagtgttgcc agagcttctggttcctcaagcaatgacaaggatcttcagacccatgcatcagatggaaga cacactagaacaaacgtctcttcttcagtcaatgctaatggttacagcgttccaggttct gcaaaaggattggctccgtcagcaaaaattgcatttgatggttctggtaacgaatcaaag gcagaggttggggcagccaaatcttctatggtgaaggatgatggaaatgatattgccgac ttcactagaggatcctcttctcgtttagttcattcccccaggcatgaaaacacagctacc acaaaatctagtgataaaattcagaagcgaactggttctgttgatgaactagacagacca agtaagcggtggaaaggggatgtagatccaagagacttggagggtgaagttcgattctct gaaagagggaagctgttggatcctcgattggctgatgacaaagcggcgccagacgaactt ggtctatacagagcaggtaataagtcattggaaaggccaaaagaaaaaggcaatgaaaga tatgaaagggaatacagggaaagattggaccgtctggataagtctcatggtgatgacttt attatagaaaaacctagggacaggtcaatagaaagatatggaagagaacggtctattgag agaatgcaagagaggggtagtgagaggagtttcaacagactctctgacaaggctaaggat gatagaagtaaattacaatacaatgatgtttcgatagaaaaatctcacacagagggccgc ttccatggacagaacttgcatcgggcatcccctttacctcctaatatggttcctcaatct gttggggctggtaggcgtgatgaagatgctgataggaggtatggagctacgaggcattcg caaagactttctccaaggcatgaagaaaaagaactcagacggtctgaagagactgtgatt ttgcaggatgatcccaaacgtagaaaagaagattttcaagatcagaagcgtgaagaaatg aaggaggaagagagggaaagagagaaatcaaacattctaaaagaagagggttttaatgct gcatccaagagacgtaaacttacgagggagcatctaccaactatggagcctggggagtac ttaccggttaatcctctccccggtattggtatgtcacaagcatatgatggaagagacaga agggggcgaatgatccagcatgccagttacatagatgaaccgagtcttaggattcatggt aaagagttatccagcaagctgaatcgtcgtgaatcagatcctgtgtacgatcgtgaatgg gatgatgagaatagacaaagagctgatcaaaagcgaaggcatcggaagtaa

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