KEGG   Medicago truncatula (barrel medic): 11435209
Entry
11435209          CDS       T01716                                 
Name
(RefSeq) UBP1-associated protein 2A
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
mtr  Medicago truncatula (barrel medic)
Pathway
mtr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    11435209
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mtr03019]
    11435209
   03041 Spliceosome [BR:mtr03041]
    11435209
Messenger RNA biogenesis [BR:mtr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     11435209
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     11435209
Spliceosome [BR:mtr03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    11435209
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_Nup35 Cut8
Other DBs
NCBI-GeneID: 11435209
NCBI-ProteinID: XP_003617132
UniProt: G7K7P5
LinkDB
Position
5:complement(39432179..39436750)
AA seq 497 aa
MAKKRKLRSSDPEPTKQAEPEPQQEEVAEEEPTTQEEENTPIEEDQPQNEGEGEEEPEEE
VAEEEEDDQQGEDETLENQQQQDGGEASNNAAVSEQTVTVEANGGGENNNGEEEEDLELE
DEPVEKLLEPFTKEQLHALVKQAVEKYPDLSENVRQLADVDPAHRKIFVHGLGWDATAET
LTTTFSKYGEIEDCKAVTDKASGKSKGYAFILFKHRTGCRRALKQPQKVIGNRTTSCQLA
SAGPVPAPPPNAPPVSEYTQRKIFVSNVSSDIDPQKLLEFFKQFGEVDDGPLGLDKATGK
PKGFALFVYKTVESAKKALEEPNKVFEGHTLYCQKAVDGPKGYNKGGHYQQQHHHQPHHS
HHHHHGGGGGHYNPRKEKKYSHGGGGPSHGGHLMAPTGPAAGGYNAGVPPQGLNPALGQA
LSALLANQGAGLGLGNLLGGLGGAPVNQAGPPAAYGNQAAMGYGQPGLQPQYQNPQLGQS
GGVRPHPGPGGAPYMGH
NT seq 1494 nt   +upstreamnt  +downstreamnt
atggctaagaaacgaaagcttcgatcttctgaccctgaacccaccaaacaagctgaaccc
gaaccacaacaagaagaagtagccgaagaagaaccaacaacacaagaagaagaaaacaca
ccgattgaagaagatcaacctcaaaacgaaggtgaaggtgaagaagaaccagaagaagag
gtagcagaagaagaagaggatgatcaacaaggagaagacgaaaccctagaaaaccagcaa
caacaagatggcggtgaagcttcaaacaacgctgccgtgtcggagcagactgtgacggtg
gaagctaacggtggtggtgaaaacaataacggagaagaagaggaagatcttgaattggaa
gatgaacctgttgagaagcttctagaaccattcacgaaggagcaattacacgcgcttgtg
aaacaagcggttgagaagtatccagatctgtctgagaatgttcgtcagctggctgatgtg
gaccccgctcaccggaaaatcttcgttcacggtcttggatgggatgctaccgctgaaacg
ctaaccaccacgttttcgaagtacggtgaaattgaggattgtaaggctgtgactgacaag
gcatctggaaaatcaaagggatatgcatttattttgtttaagcatcggactgggtgtcgt
cgtgcgttgaagcagcctcagaaagtgattgggaataggactacatcgtgtcaattggct
tccgctggacctgttccggccccaccaccgaatgcgccaccggtgtctgagtatactcaa
aggaagatttttgtgagtaatgtgagttctgatattgatcctcagaagctgcttgagttt
ttcaagcagtttggagaggtggatgatggcccattggggttggataaggcgactgggaag
ccgaaaggttttgcgctctttgtttataagacggtagagagtgctaagaaggcgttggaa
gagccgaataaggtgtttgaggggcatactttgtattgtcagaaggctgttgatggtcct
aagggttacaacaaggggggtcattatcagcagcaacatcatcatcagcctcatcattcg
catcatcaccatcatggtggtggtggtggtcactacaatccgaggaaagaaaagaagtat
tcacatggtggtggtggcccatcacatggtggtcacttaatggctcctactggtcctgct
gctggtggttacaatgcgggtgtgccgcctcagggattgaatccggcacttggacaggct
ttgtccgctttgcttgctaatcaaggagctggattggggcttgggaatttgcttggaggt
cttggtggtgcgcctgtgaatcaagctggtcctcctgctgcgtatggcaatcaggctgct
atgggatatggccagcctgggttgcagccacagtaccagaatcctcagctggggcaaagc
ggtggtgttagacctcatcctggtcccggtggcgctccttacatgggtcactag

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