Medicago truncatula (barrel medic): 11435298
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Entry
11435298 CDS
T01716
Name
(RefSeq) WD-40 repeat-containing protein MSI4
KO
K10752
histone-binding protein RBBP4
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03082
ATP-dependent chromatin remodeling
mtr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
11435298
03083 Polycomb repressive complex
11435298
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mtr03036
]
11435298
Chromosome and associated proteins [BR:
mtr03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
11435298
Histone modification proteins
HAT complexes
HATB complex
11435298
HDAC complexes
Sin3A-HDAC complex
11435298
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
11435298
PRC2.2
11435298
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
11435298
Heterochromatin formation proteins
Other heterochromatin formation proteins
11435298
Chromatin remodeling factors
NuRD complex
11435298
NuRF complex
11435298
NuRF complex (fruit fly)
11435298
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML
EIF3I
eIF2A
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
ANAPC4_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
11435298
NCBI-ProteinID:
XP_003597606
UniProt:
A2Q445
LinkDB
All DBs
Position
2:49087453..49094178
Genome browser
AA seq
479 aa
AA seq
DB search
MNESKKEGTISTTPLSIEERYSQWKSLVPVLYDWLANHNLVWPSQSCRWGSLLDHATYKN
RHRLYLSEQTDGTAPNTLVIATCEIVKPRVAAAEHIAMFNEEARSPFVKKVKTILHPGEV
NRIRELPSNTNIVATHTDSPNVMIWNVESQPNRNNAALDAPTSIPDLVLTGHKDNAEFAL
AMCSTEPFVLSGGRDKLVVLWSIHDHIATLATEEEPDVNEGSNVGGNSEKAAQSPSVGAR
GVYRGHKDTVEDVQFCPSSAQEFCSVGDDSCLILWDARVGSFPAVKVEKAHDGDVHCVDW
NTHDINFILTGSADNTVRMFDRRKLNNRGGIGSPVYKFEGHDEPVLCVQWNPAKSSVFGS
GAEDGIINIWDHEKVGKTSGSADTTVPETSPGLFFRHAGHRDKVVDFHWNASDPWTIVSV
SDDCASTGGGGTLQIWRMMDLIYRPEDEVMAELDKFKSHILGCDTVTDSATDPATPSHT
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaatcgaagaaagagggaacaatttcaacaaccccactctcaatcgaagaaaga
tacagtcaatggaagtcactcgttccagtcctctacgactggctagcgaatcacaatcta
gtatggccatcacaatcatgccgttggggttcacttcttgatcatgctacttacaagaat
cgtcatcgtctttatctttctgaacaaactgatggaactgctcccaatacgcttgttatt
gctacttgtgaaattgttaaacctagggttgctgctgctgaacatattgctatgtttaat
gaagaggcgcgttctccatttgttaagaaggttaaaactattcttcatcccggtgaggta
aatagaatcagagaactcccgtcaaatactaatatagttgccacacatacagatagtcca
aatgttatgatttggaatgttgaatctcaacctaaccggaataatgctgctctggatgct
cccacttccatcccagacttggtattaactggacataaggataatgctgaatttgcacta
gctatgtgttcaactgagccctttgttctttccggagggagagacaagcttgtggtgtta
tggagtattcatgatcatattgcaactttagctacagaagaagaacccgatgttaatgag
ggctctaatgttgggggaaatagcgagaaagctgcacaaagcccgtctgttggagcaagg
ggcgtctaccggggtcataaagacactgttgaagatgtgcagttttgcccctcaagtgca
caggagttctgtagtgtaggtgatgattcttgtctcatactctgggatgcgcgtgttgga
tcttttccagctgtcaaggttgagaaggcacatgatggagatgtacattgcgttgattgg
aatactcatgacatcaattttattctgactggctctgctgataacacagttcgcatgttt
gatcgccggaaactaaacaatcgtggaggaattgggtctcctgtttataaatttgaaggc
catgatgaaccagtcctctgtgtacagtggaatcctgctaaatcatctgtatttggaagt
ggtgccgaagatggaattataaacatctgggaccatgaaaaggttggtaaaacatcaggt
tctgctgatactacagtaccagagacttcccctggtttattctttcgtcatgcagggcat
agggataaggttgttgactttcattggaatgcatctgatccatggacaattgttagtgta
tctgatgattgtgcaagcactggtggaggtggcaccctgcagatctggcggatgatggat
ctaatttatcgaccagaggacgaggtgatggctgagctggataagttcaaatctcatatc
ttaggatgcgacactgtcactgacagtgccactgaccctgccactccatcacatacgtga
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