Medicago truncatula (barrel medic): 11435521
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Entry
11435521 CDS
T01716
Name
(RefSeq) DNA damage-binding protein 1
KO
K10610
DNA damage-binding protein 1
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03420
Nucleotide excision repair
mtr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
11435521
09124 Replication and repair
03420 Nucleotide excision repair
11435521
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mtr04121
]
11435521
03400 DNA repair and recombination proteins [BR:
mtr03400
]
11435521
Ubiquitin system [BR:
mtr04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Adoptor protein
11435521
DNA repair and recombination proteins [BR:
mtr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
11435521
TCR (transcription coupled repair) factors
Cul4-CSA complex
11435521
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS1_N
CPSF_A
Motif
Other DBs
NCBI-GeneID:
11435521
NCBI-ProteinID:
XP_003630019
UniProt:
G7L9M1
LinkDB
All DBs
Position
8:complement(41221315..41232771)
Genome browser
AA seq
1089 aa
AA seq
DB search
MSIWNYVVTAHKPTNVTHSCVGNFTSPQDLNLILAKCTRIEIHLLTAQGLQSILDVPLYG
RIATLELFRPHGETQDFLFIATERYKFCVLQWDTEKSELVTRSMGDVSDRIGRPTDNGQI
GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCPKPTIVVL
YQDNKDARHVKTYEVALKDKDFVEGPWSQNSLDNGADLLIPVPPPLCGVLIIGEETIVYC
SANGFKAIPIRAAITKAYGRVDPDGSRYLLGDHTGLLSLLVITHEKEKVTGLKIEPLGET
SIASTISYLDNAFVYIGSSYGDSQLIKLNLQPDPKGSYVEVLERYVNLGPIVDFCVVDLE
RQGQGQVVTCSGAYKDGSLRVVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVS
FISETRILAMNLEDELEETEIEGFCSQVQTLFCHDAVHNQLVQVTSNSVRLVSSSTRELL
NEWHAPSDYSVNVATANATQVLLATGGGHLVYLEIGDGILQEVKHAQLEYEISCLDINPI
GENPNQSQLAAVGMWTDISVRLFSLPELNLITKEHLGGEIIPRSVLLCAFEGISYLLCAL
GDGHLLNFMLNTSTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL
LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRTIPLGEHARRICH
QEQTRTFAICSLKYNSASAEESEMHFVRLLDDQTFDFISVYPLDTYEYGCFIISCSFSDD
NNVYYCVGTAYVLPEENEPTKGRILVFSVEEGKLQLVAEKETKGAVYCLNAFNGKLLAAI
NQKIQLYKWVLREDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG
AIEERARDYNANWMSAVEILDDDVYLGAENSFNLFTVRKNSEGATDEERGRLEVAGEYHL
GEFINRFRHGSLVMRLPDSDVGQIPTVIFGTINGVIGVIASLPHEQYVFLEKLQSNLRKV
IKGVGGLSHEQWRSFNNEKKTVEARNFLDGDLIESFLDLKRSKMDEISKAMEVSVEELAK
RVEELTRLH
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgagtatatggaactacgttgttaccgctcacaaacctaccaacgttactcactcctgc
gtcggcaatttcaccagtcctcaggacctcaatctcattctcgcgaaatgtactcgtatc
gagattcacttgcttactgctcagggcttgcagtctattttggatgtgccgttatatgga
agaattgctacgcttgaactatttcgccctcatggcgaaacacaggattttctgttcatt
gctaccgaaagatacaagttttgtgttcttcaatgggataccgagaaatccgagcttgtt
acacgatcgatgggggatgtttctgatcgtataggaagaccaacggataatggtcagatt
ggtattatagatcctgattgtaggttgattggactccacttgtatgatggtttatttaag
gttattccctttgacaataaaggacaactcaaggaagcttttaatatcaggcttgaggag
ctccaagttttggacataaaatttctgtatggttgtccaaagccaactatcgtggttctt
taccaggataacaaagatgcccgtcatgttaaaacatatgaggttgctctgaaggataaa
gattttgttgagggcccatggtcacaaaacagtcttgataatggggctgatttattgata
ccggttcccccaccactttgtggtgtgcttattattggagaagaaaccatagtatactgc
agtgctaatggttttaaagctattccaatcagagctgcaattacaaaagcctatggaaga
gttgatcccgatggttctagatatttacttggtgaccatacagggttgcttagtctactt
gtaataacccacgagaaagaaaaggttaccggtctcaaaatagagccacttggggagact
tccattgcatctacgatttcataccttgataatgcatttgtgtatattggttcaagctac
ggagattcacagctcattaaactaaatcttcagcctgatccaaaaggttcttatgtggaa
gtcttggaaaggtatgtcaatttggggcccattgttgacttctgtgtggtagaccttgaa
aggcaaggccaaggtcaggttgtgacttgctctggagcttacaaggatggttccctacgc
gttgttcgtaatggaataggtatcaatgaacaggcatcagtagaacttcaaggtatcaaa
ggaatgtggtcactaagatcctcaacagatgatccttttgacactttcctggttgtaagt
tttataagtgaaacaagaatattagcaatgaatctcgaggatgagctggaagaaactgag
attgagggattctgttctcaagtacagacattattttgccatgatgcagttcacaatcaa
cttgtacaagtcacttcgaactctgtaagactagtcagttcctcaaccagagagctcctg
aatgagtggcatgcaccgtcagactattcagtaaatgtagctactgccaatgcaacccag
gttttgttggctacaggtggtggtcacttggtttaccttgaaattggagatggtatatta
caggaagtaaagcatgcccaactggagtatgaaatctcatgcctagacattaatcccatt
ggtgaaaatcccaatcagagtcagctagctgcagttggaatgtggactgacataagtgtt
agacttttttctcttcctgaacttaatctcatcacaaaggagcatttaggaggagagata
atacctcgatctgttcttctttgtgcgtttgaagggatatcttacttgctatgtgccctt
ggtgatggccatctcttaaactttatgttgaacacaagcacgggtgagttaacagatagg
aaaaaggtctctcttgggacacaacctattactctacggactttctcatccaagaatact
acccatgtatttgctgcatctgaccggccaactgtgatttatagtagtaacaaaaaacta
ctttatagtaatgttaatctgaaggaagtgagtcacatgtgccctttcaactctgctgct
tttcccgacagtttagcgattgcaaaagaaggtgagcttactattggcaccattgatgac
atacaaaaacttcacattcgcactattccattgggggagcatgcacgacggatatgccat
caggagcaaactaggacatttgctatttgtagtttgaagtataactcagcaagtgctgaa
gaatctgaaatgcattttgtccgcttgctcgatgaccagacttttgacttcatatcagtt
tatccacttgacacctatgaatatggttgctttataattagctgctccttctcagatgat
aataacgtgtattactgtgttggaactgcatatgtattgcctgaggaaaatgaaccaacc
aagggaaggattctcgttttttctgttgaagaggggaagctacagttagttgccgagaaa
gagacaaaaggagctgtttactgcttgaacgcgtttaatggtaaattgctcgctgctatt
aatcaaaagattcagctgtacaagtgggtgctccgggaagacggtactcgtgaattacag
tctgaatgtggacaccacgggcacatactggctttatatgtgcaaactagaggagatttt
attgtagtcggtgatctgatgaagtccatctccttgttaatctataagcatgaggaaggt
gctattgaggagagagctcgagactataatgcaaattggatgtcagctgttgaaatcctc
gatgatgatgtataccttggtgcagaaaacagtttcaatctcttcactgttcgaaaaaat
agcgaaggcgccactgatgaagaacggggtcgtcttgaagtggctggtgagtatcacctt
ggagagtttatcaatcggtttcggcatggctctcttgttatgcgcttgccagattctgac
gtaggccagattccaactgttatatttggcaccattaatggtgttattggggtaatcgcc
tctcttcctcatgagcagtatgtattcttagagaagcttcagtcaaacttgaggaaggtg
attaaaggcgttggaggactcagccacgagcagtggagatcatttaataatgagaagaaa
actgtagaagccagaaactttttggatggggatttaattgagtcatttcttgatctcaaa
cgcagtaagatggatgagatttccaaggcaatggaagtttctgttgaagagttagccaag
agagtagaagagttgactaggctgcactga
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