Medicago truncatula (barrel medic): 11435546
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Entry
11435546 CDS
T01716
Name
(RefSeq) poly(rC)-binding protein 4
KO
K21444
poly(rC)-binding protein 3/4
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtr03019
]
11435546
Messenger RNA biogenesis [BR:
mtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
11435546
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SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
DUF2570
KH_5
Motif
Other DBs
NCBI-GeneID:
11435546
NCBI-ProteinID:
XP_003624229
UniProt:
G7KSF8
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All DBs
Position
7:37464783..37472456
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AA seq
379 aa
AA seq
DB search
MSQQDQIPINPNIVPQQNQLPPIRMHHPIHMQQQQQMHMSMPNMVMQQMHMPYHMPLQLP
YSTHDAGYPSSMKRRRDDEDLGTASSAELSAAKRAKGQDVIFRIVVPSKQIGKVIGKEGC
RIQKIREMTRANIKIADAIARHEERVIIISSKDNDEMVTDAEKALEQIANLILKEDNSSF
DASKLTAGHVAANTIRLLIAGSQAGGLIGMSGQNIEKLRNSSGAMITVLAPSQLPLCASA
HESDRVVQLSGDVSTVMKALEEIGCQLRENPPRQVISISPTYNYAAIRPSQPYLDPNSVD
YVTFEMLISETMVGGLIGRCGSNISRIRNESGAMIKVYGGKGEQKHRQIQFGGSAEQVAL
AKKRVDEYIYDQLIQQPDT
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagcaagatcaaatcccaataaaccccaacatagttcctcaacagaaccaatta
ccaccaatccgtatgcatcatcccatccacatgcagcagcagcagcagatgcacatgtcc
atgcccaacatggtcatgcaacaaatgcacatgccatatcacatgccacttcagctccca
tactccacccacgatgccggatacccttcatccatgaagcgtcgtcgagacgacgaagat
ctgggtacagcctcctcggcggaattatcagcggcgaaacgcgccaagggacaggatgtg
atattcaggatcgttgtgccgtcgaagcagatcggaaaggttattgggaaagaaggttgc
cgtatacaaaagattcgggaaatgactagagctaatatcaaaattgctgacgctattgct
agacatgaagagcgtgttatcattattagctctaaagataatgatgaaatggttacggat
gcagagaaagctctagaacagatagcaaatttaatcttaaaggaagataatagcagtttt
gatgcatcaaaacttactgcagggcacgttgctgccaatacaataagacttttgattgct
gggtcccaggcaggtggattgattgggatgtcgggtcaaaacattgagaagttacggaac
tcttctggtgccatgattactgttcttgcaccgagtcagttgcctttatgtgcttctgcc
catgaatctgatagagtagtacagttatcgggagatgtttccacggtaatgaaagcattg
gaggagataggttgccagttaagggaaaatcccccaagacaagtgatttcaatcagccca
acatacaactacgctgcaattcgaccatcccagccatatcttgacccaaattcagttgat
tatgttacatttgagatgctgatttcggaaacaatggttggtgggttgattggaagatgt
ggctcaaacatatcaaggatcagaaatgagtctggagcaatgatcaaggtttatggtgga
aaaggtgagcagaagcataggcaaattcaattcggtggtagtgctgaacaggtagctttg
gcaaaaaagagagttgatgaatatatatacgatcagttgatacagcaacctgatacataa
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