Medicago truncatula (barrel medic): 11435666
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Entry
11435666 CDS
T01716
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog A isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03440
Homologous recombination
mtr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
11435666
03460 Fanconi anemia pathway
11435666
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mtr04121
]
11435666
03036 Chromosome and associated proteins [BR:
mtr03036
]
11435666
03400 DNA repair and recombination proteins [BR:
mtr03400
]
11435666
Ubiquitin system [BR:
mtr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
11435666
Chromosome and associated proteins [BR:
mtr03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
11435666
DNA repair and recombination proteins [BR:
mtr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
11435666
FA (Fanconi anemia) pathway
Downstream FA components
11435666
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA2
BRCA-2_helical
Motif
Other DBs
NCBI-GeneID:
11435666
NCBI-ProteinID:
XP_003601582
UniProt:
G7J9J4
LinkDB
All DBs
Position
3:41026039..41033814
Genome browser
AA seq
1254 aa
AA seq
DB search
MSSWQILPDADNNYRWQINSDDTSNVIPPSPPPFSIPTPPLPSMYDLLIHASASHLFQPQ
EEENAIDDSFGFANSLFKTGSGRKVTISSKGLVRAKTLLGLGLHEETVGANIQTPQNAKK
FNSFHQDEPRLQVIDSCKKTSAASFQSPLVSRLKNGFENKIVQPDTGSRSGVGAKQAPIK
FQTGVSNIQAPQTQNASFFDAFDEELPDLQLMDSCKKMSAASFQSPLVGRLHMGSENKVA
QLDSGSVSGGKDAPLTNSLFKTGSGRKVTISSKGLVRAKTLLGLGLHEETVGANIQTPQN
AEKLHAFDEELPHVQLMDSCKMMSSASFQSPLVGRLKNGFESKFVQPDSGGGAKQAPIKF
QTASGRSLSISGDALKRARRLLGDPDLGDFFDGGDSLFSFLDQGQTSTITSSAERSESKN
THTPLVHQMTPENHPNHMSKSFTYPLQPSKQMEFSNKLRNEGNGNNLIVKFDDVVNESDC
GCKSSITPGQKPLYNKNEVADTTIKSSSLNGFSSRMDSREKPLGRALVDISNTIKTVHTN
HKQPASGKRRIGLHATVSSFKKPRISNISASGGQDVQYFSNDLAQLSSGASGFKRKVSTR
YPFHHPRMYIKDYFAVPPLEQKVVSVISNFPNPARQVTSCNAGAYIFHDGSDSNDMGAEA
FIHLLTQHGASLRFASKEWVLNHYKWIVWKLACYERCYPARCAGKFLTVSNVLEELKYRY
EREVNHGHRSTIKKILEGDGLPSSMMTLCISSIHSDHVLDSGALSEPQTGNQSNEALKVE
LTDGWYSINAILDVPLSKQLAAGRLFVGQKLRIWGAGLCGWNGPVSPLEVSSTVSLLLHI
NGTYRAHWADRLGLCKVAGPPLAFKCIKRNGGLVPQTLAGITRIYPILYKERLSSGRSVV
ISERMENKMMELHNQRRSAVVDNIVSEYQKEMTGSHIYDYGNSEGAKIYKMLETAAEPEF
LMADMTPEQLSSFAAYKAKLNANRQSQMESSIEKALKDSGLGDREVTPFMRLRVVGLTYK
NQRDKPTEGIVTIWNPTQKQRQELSEGEAYAIAELIPSGSDSDVLHLQTRGSTTKWLPLS
SNAKEQFKPFSNNRNSIPLSSLSDIPLSNEFDVVAFVVHVGKVYTSSQQKKQWVFVTDGS
IMNGLQSQKVTDTLLAICFCSPLFDHDSFPPINHNLAGSTVGFCNLIKKEKDHTNHIWVA
DANEISTYYLKFDSPQCSHLRNAASSVRRWASNSSLIIEKLKEKVLGIVGDCKA
NT seq
3765 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcatggcagatcctccccgacgccgataacaattaccggtggcaaatcaactcc
gacgacacttcaaatgttatcccaccttcaccccctcctttttctattcccacccctccc
cttccttccatgtacgatcttctcattcatgcctccgcctcacacctttttcaacctcaa
gaggaagaaaatgcaatagatgatagttttggcttcgcgaattcgcttttcaagacaggt
tctggaagaaaagttactatttcttctaaaggtcttgttagagcaaagacattattagga
ttgggattgcatgaagaaactgttggtgctaatattcaaacacctcagaatgctaagaaa
tttaactcttttcatcaagacgaacctcgtttacaggtaatagatagctgtaaaaagacg
agtgctgcgtcatttcaaagtcctttagttagtagattgaaaaatggttttgagaataaa
attgtgcaaccagatactggtagtcgtagtggtgttggtgctaagcaagctccgataaaa
ttccaaactggtgttagtaatattcaagcccctcagactcagaatgctagtttttttgat
gcttttgatgaagaattgcctgatttgcagcttatggatagttgtaaaaagatgagtgct
gcgtcgtttcaaagtcctttagttggtaggttgcacatgggttctgagaataaagttgcg
caacttgatagtggtagtgttagtggtggtaaggatgcaccactcacgaattcgcttttc
aagacaggttctggaagaaaagttactatttcttctaaaggtcttgttagagcaaagaca
ttattaggattgggattgcatgaagaaactgttggtgctaatattcaaacccctcagaat
gctgaaaaattgcatgcttttgatgaagaattgcctcatgtacagcttatggatagttgt
aaaatgatgagttccgcttcgtttcaaagtcctttagttggtaggttgaagaatggtttt
gagagtaaatttgtgcaaccagatagtggcggtggtgctaagcaagctccaattaaattc
caaactgccagtgggaggtcgttatctatttctggtgatgcgttgaaacgcgctaggcgc
cttcttggtgatcctgatttgggagatttctttgatggtggagattcacttttctcgttt
ctggatcagggacaaaccagcacaatcacttcctccgctgaaagaagtgagagtaaaaat
actcatactcctttggtgcatcaaatgacaccagagaatcatcccaatcacatgtcaaaa
agtttcacataccctttgcagccttcaaaacaaatggaattttcaaataagcttcgcaac
gaaggtaatgggaataacttaatcgtgaagttcgatgatgttgtgaatgaaagtgactgt
ggctgtaaaagtagcataactcctggacagaaacctttgtataacaagaatgaagtggct
gacacgacaataaaaagctcttcattgaatggtttttcgtcaagaatggattcacgtgaa
aaaccattgggcagggcattggtggatatttccaataccattaagacagttcatacaaat
cataagcagcctgctagtgggaaaaggagaataggattacatgcaactgtttcttccttt
aaaaagcctcgaatttccaatatctctgcctctggtggccaagatgttcaatatttttct
aatgatttggctcaattatcctctggtgcttctggattcaaaagaaaagtttctacccga
tatccatttcaccatccaaggatgtacatcaaggattattttgctgttcctccattagag
caaaaagtggtcagtgtaatcagtaattttccgaacccagccagacaggtgacatcatgt
aatgcaggagcgtacatattccatgacggctctgatagtaatgatatgggagcagaagct
ttcatccatctattgacacagcacggagcgtccctgcgttttgcctccaaagagtgggtc
ttgaatcattacaaatggattgtatggaaactggcatgctatgagagatgctatccagct
aggtgtgctggaaaatttctgactgtatcaaatgtgcttgaggaactgaagtacagatat
gaaagagaagtgaatcatggccaccggtctaccatcaagaaaattcttgagggggatgga
ttgccttcttcaatgatgactctctgtatatctagcattcactctgatcatgtgcttgac
agtggggcattatctgagccacaaaccgggaatcagagcaatgaggcattaaaagttgaa
ttaactgatggatggtattctattaatgccattttagatgttccattgtcaaagcaactg
gctgctggaagattgtttgtaggacagaagcttcggatctggggagcaggtttatgcggc
tggaatgggccagtttcaccccttgaggtgtcatcaacagttagtttacttcttcacata
aatggaacatatagagctcattgggcagatcggttaggactttgtaaagttgctggtcca
cctttggctttcaaatgcataaaaagaaatggcggtttagtacctcaaactttggcagga
attacccgaatatatcccattctttacaaagaaaggttaagcagtggacgatctgttgtc
atatcagagaggatggagaataaaatgatggagctgcacaatcaaagacgctcggctgtt
gtagataatatcgtttcggagtatcagaaggaaatgactggttcacatatttacgattac
ggcaatagcgaaggggctaagatatataagatgctggagacagctgcagaacccgaattc
ttaatggcagatatgactccggagcaacttagttcttttgctgcttataaggcaaaatta
aatgcaaatagacagtcacaaatggaaagttcaattgagaaagctttgaaagattctggc
ttgggagacagagaagtaacgccatttatgaggttgcgagtagttggattaacttataaa
aatcaacgagataagcctacagagggcatagtaacaatctggaacccaacacagaagcag
cgtcaggagctgtcagagggagaagcatatgcaattgcagaactcataccatctggctct
gattcggatgtccttcacttgcagactagaggatctactaccaagtggttgccattatct
tctaatgcaaaggaacagtttaagccattttccaataatcggaattcaatcccattgtca
agtctgagtgacatcccactttccaacgagttcgatgttgtcgcatttgttgtgcatgtg
ggaaaggtttatacgtcaagtcagcaaaagaagcaatgggtttttgtgactgatggatcc
atcatgaatggtttacagtcacaaaaggttaccgacacattgcttgccatttgcttttgc
tccccattgtttgatcatgattcatttccaccgatcaaccataaccttgccggatctacg
gttggtttctgtaatcttataaaaaaggagaaggaccatacaaaccatatatgggttgct
gatgctaatgaaatttcaacctattatttgaagtttgattccccacagtgttctcacctc
agaaatgctgccagctccgtcagaagatgggctagcaattcgagcttgataatagagaaa
ctcaaggaaaaggtgttgggtatagttggtgattgtaaagcctag
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