KEGG   Medicago truncatula (barrel medic): 11435666
Entry
11435666          CDS       T01716                                 
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog A isoform X1
  KO
K08775  breast cancer 2 susceptibility protein
Organism
mtr  Medicago truncatula (barrel medic)
Pathway
mtr03440  Homologous recombination
mtr03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    11435666
   03460 Fanconi anemia pathway
    11435666
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mtr04121]
    11435666
   03036 Chromosome and associated proteins [BR:mtr03036]
    11435666
   03400 DNA repair and recombination proteins [BR:mtr03400]
    11435666
Ubiquitin system [BR:mtr04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   BRCC complex
    11435666
Chromosome and associated proteins [BR:mtr03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Other centrosome duplication proteins
     11435666
DNA repair and recombination proteins [BR:mtr03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA complex
     11435666
   FA (Fanconi anemia) pathway
    Downstream FA components
     11435666
SSDB
Motif
Pfam: BRCA-2_OB1 BRCA2 BRCA-2_helical
Other DBs
NCBI-GeneID: 11435666
NCBI-ProteinID: XP_003601582
UniProt: G7J9J4
LinkDB
Position
3:41026039..41033814
AA seq 1254 aa
MSSWQILPDADNNYRWQINSDDTSNVIPPSPPPFSIPTPPLPSMYDLLIHASASHLFQPQ
EEENAIDDSFGFANSLFKTGSGRKVTISSKGLVRAKTLLGLGLHEETVGANIQTPQNAKK
FNSFHQDEPRLQVIDSCKKTSAASFQSPLVSRLKNGFENKIVQPDTGSRSGVGAKQAPIK
FQTGVSNIQAPQTQNASFFDAFDEELPDLQLMDSCKKMSAASFQSPLVGRLHMGSENKVA
QLDSGSVSGGKDAPLTNSLFKTGSGRKVTISSKGLVRAKTLLGLGLHEETVGANIQTPQN
AEKLHAFDEELPHVQLMDSCKMMSSASFQSPLVGRLKNGFESKFVQPDSGGGAKQAPIKF
QTASGRSLSISGDALKRARRLLGDPDLGDFFDGGDSLFSFLDQGQTSTITSSAERSESKN
THTPLVHQMTPENHPNHMSKSFTYPLQPSKQMEFSNKLRNEGNGNNLIVKFDDVVNESDC
GCKSSITPGQKPLYNKNEVADTTIKSSSLNGFSSRMDSREKPLGRALVDISNTIKTVHTN
HKQPASGKRRIGLHATVSSFKKPRISNISASGGQDVQYFSNDLAQLSSGASGFKRKVSTR
YPFHHPRMYIKDYFAVPPLEQKVVSVISNFPNPARQVTSCNAGAYIFHDGSDSNDMGAEA
FIHLLTQHGASLRFASKEWVLNHYKWIVWKLACYERCYPARCAGKFLTVSNVLEELKYRY
EREVNHGHRSTIKKILEGDGLPSSMMTLCISSIHSDHVLDSGALSEPQTGNQSNEALKVE
LTDGWYSINAILDVPLSKQLAAGRLFVGQKLRIWGAGLCGWNGPVSPLEVSSTVSLLLHI
NGTYRAHWADRLGLCKVAGPPLAFKCIKRNGGLVPQTLAGITRIYPILYKERLSSGRSVV
ISERMENKMMELHNQRRSAVVDNIVSEYQKEMTGSHIYDYGNSEGAKIYKMLETAAEPEF
LMADMTPEQLSSFAAYKAKLNANRQSQMESSIEKALKDSGLGDREVTPFMRLRVVGLTYK
NQRDKPTEGIVTIWNPTQKQRQELSEGEAYAIAELIPSGSDSDVLHLQTRGSTTKWLPLS
SNAKEQFKPFSNNRNSIPLSSLSDIPLSNEFDVVAFVVHVGKVYTSSQQKKQWVFVTDGS
IMNGLQSQKVTDTLLAICFCSPLFDHDSFPPINHNLAGSTVGFCNLIKKEKDHTNHIWVA
DANEISTYYLKFDSPQCSHLRNAASSVRRWASNSSLIIEKLKEKVLGIVGDCKA
NT seq 3765 nt   +upstreamnt  +downstreamnt
atgtcgtcatggcagatcctccccgacgccgataacaattaccggtggcaaatcaactcc
gacgacacttcaaatgttatcccaccttcaccccctcctttttctattcccacccctccc
cttccttccatgtacgatcttctcattcatgcctccgcctcacacctttttcaacctcaa
gaggaagaaaatgcaatagatgatagttttggcttcgcgaattcgcttttcaagacaggt
tctggaagaaaagttactatttcttctaaaggtcttgttagagcaaagacattattagga
ttgggattgcatgaagaaactgttggtgctaatattcaaacacctcagaatgctaagaaa
tttaactcttttcatcaagacgaacctcgtttacaggtaatagatagctgtaaaaagacg
agtgctgcgtcatttcaaagtcctttagttagtagattgaaaaatggttttgagaataaa
attgtgcaaccagatactggtagtcgtagtggtgttggtgctaagcaagctccgataaaa
ttccaaactggtgttagtaatattcaagcccctcagactcagaatgctagtttttttgat
gcttttgatgaagaattgcctgatttgcagcttatggatagttgtaaaaagatgagtgct
gcgtcgtttcaaagtcctttagttggtaggttgcacatgggttctgagaataaagttgcg
caacttgatagtggtagtgttagtggtggtaaggatgcaccactcacgaattcgcttttc
aagacaggttctggaagaaaagttactatttcttctaaaggtcttgttagagcaaagaca
ttattaggattgggattgcatgaagaaactgttggtgctaatattcaaacccctcagaat
gctgaaaaattgcatgcttttgatgaagaattgcctcatgtacagcttatggatagttgt
aaaatgatgagttccgcttcgtttcaaagtcctttagttggtaggttgaagaatggtttt
gagagtaaatttgtgcaaccagatagtggcggtggtgctaagcaagctccaattaaattc
caaactgccagtgggaggtcgttatctatttctggtgatgcgttgaaacgcgctaggcgc
cttcttggtgatcctgatttgggagatttctttgatggtggagattcacttttctcgttt
ctggatcagggacaaaccagcacaatcacttcctccgctgaaagaagtgagagtaaaaat
actcatactcctttggtgcatcaaatgacaccagagaatcatcccaatcacatgtcaaaa
agtttcacataccctttgcagccttcaaaacaaatggaattttcaaataagcttcgcaac
gaaggtaatgggaataacttaatcgtgaagttcgatgatgttgtgaatgaaagtgactgt
ggctgtaaaagtagcataactcctggacagaaacctttgtataacaagaatgaagtggct
gacacgacaataaaaagctcttcattgaatggtttttcgtcaagaatggattcacgtgaa
aaaccattgggcagggcattggtggatatttccaataccattaagacagttcatacaaat
cataagcagcctgctagtgggaaaaggagaataggattacatgcaactgtttcttccttt
aaaaagcctcgaatttccaatatctctgcctctggtggccaagatgttcaatatttttct
aatgatttggctcaattatcctctggtgcttctggattcaaaagaaaagtttctacccga
tatccatttcaccatccaaggatgtacatcaaggattattttgctgttcctccattagag
caaaaagtggtcagtgtaatcagtaattttccgaacccagccagacaggtgacatcatgt
aatgcaggagcgtacatattccatgacggctctgatagtaatgatatgggagcagaagct
ttcatccatctattgacacagcacggagcgtccctgcgttttgcctccaaagagtgggtc
ttgaatcattacaaatggattgtatggaaactggcatgctatgagagatgctatccagct
aggtgtgctggaaaatttctgactgtatcaaatgtgcttgaggaactgaagtacagatat
gaaagagaagtgaatcatggccaccggtctaccatcaagaaaattcttgagggggatgga
ttgccttcttcaatgatgactctctgtatatctagcattcactctgatcatgtgcttgac
agtggggcattatctgagccacaaaccgggaatcagagcaatgaggcattaaaagttgaa
ttaactgatggatggtattctattaatgccattttagatgttccattgtcaaagcaactg
gctgctggaagattgtttgtaggacagaagcttcggatctggggagcaggtttatgcggc
tggaatgggccagtttcaccccttgaggtgtcatcaacagttagtttacttcttcacata
aatggaacatatagagctcattgggcagatcggttaggactttgtaaagttgctggtcca
cctttggctttcaaatgcataaaaagaaatggcggtttagtacctcaaactttggcagga
attacccgaatatatcccattctttacaaagaaaggttaagcagtggacgatctgttgtc
atatcagagaggatggagaataaaatgatggagctgcacaatcaaagacgctcggctgtt
gtagataatatcgtttcggagtatcagaaggaaatgactggttcacatatttacgattac
ggcaatagcgaaggggctaagatatataagatgctggagacagctgcagaacccgaattc
ttaatggcagatatgactccggagcaacttagttcttttgctgcttataaggcaaaatta
aatgcaaatagacagtcacaaatggaaagttcaattgagaaagctttgaaagattctggc
ttgggagacagagaagtaacgccatttatgaggttgcgagtagttggattaacttataaa
aatcaacgagataagcctacagagggcatagtaacaatctggaacccaacacagaagcag
cgtcaggagctgtcagagggagaagcatatgcaattgcagaactcataccatctggctct
gattcggatgtccttcacttgcagactagaggatctactaccaagtggttgccattatct
tctaatgcaaaggaacagtttaagccattttccaataatcggaattcaatcccattgtca
agtctgagtgacatcccactttccaacgagttcgatgttgtcgcatttgttgtgcatgtg
ggaaaggtttatacgtcaagtcagcaaaagaagcaatgggtttttgtgactgatggatcc
atcatgaatggtttacagtcacaaaaggttaccgacacattgcttgccatttgcttttgc
tccccattgtttgatcatgattcatttccaccgatcaaccataaccttgccggatctacg
gttggtttctgtaatcttataaaaaaggagaaggaccatacaaaccatatatgggttgct
gatgctaatgaaatttcaacctattatttgaagtttgattccccacagtgttctcacctc
agaaatgctgccagctccgtcagaagatgggctagcaattcgagcttgataatagagaaa
ctcaaggaaaaggtgttgggtatagttggtgattgtaaagcctag

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