Medicago truncatula (barrel medic): 11435669
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Entry
11435669 CDS
T01716
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 2
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
11435669
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mtr01002
]
11435669
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mtr04121
]
11435669
Enzymes [BR:
mtr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
11435669
Peptidases and inhibitors [BR:
mtr01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
11435669
Ubiquitin system [BR:
mtr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
11435669
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
11435669
NCBI-ProteinID:
XP_003601616
UniProt:
G7JA39
LinkDB
All DBs
Position
3:41186583..41191329
Genome browser
AA seq
1070 aa
AA seq
DB search
MAKKIKKRGRSSVKEKAVIIDSSPKIVTESCNPPTTESVGEEVSVAKETNPCPHLVKGIQ
LDILSGKVESSAPIRCEGCREGAADRRGGKGKGKHGKKKGGADSKSDSKSIWVCLECGQY
NCGGVGLPITPNCHAIVHSKKARHPLVVNIEKPQLCWCFRCNMLIQVDKLETDEASHVIS
DVVKLLKGRSSGKTLVDVEDVSIGDGSVTSEIKLGSLSTSGSYGQGGYVVRGMVNLGNTC
FFNSIMQNLLAMNKLRDNFLRVDAFVGPLISSLKKLFTETNPESGFKNIINPRSFFGCVC
SKSPQFRGYQQHDSHELLRCLLDGLSTEELAGRKQNGSLKRDGTSSKTLVDALFGGQISS
TVCCNECGHSSTVYEPFLDLSLPVPTKKPPPRKAQPAPRTRKTKPPPKKGAKSRVKVNRD
VDPLPVQNIPSQSSCLDQSVTSGAGELVISSGVSTVLGSEEISSEAKVNRDDDPLPTQNV
PSQSSSHESSCPDQSVTSVAGELVASSGVSTVLGSEEISSEANKEDLSPSNLVTVVESQQ
IQGFDSVATKTSDSSDAFAWLDFVEAETNEEDLSPPNLVTVGESQQMQGLDSVANKTSDS
SDDFPWLDYVEAETTIDEYASISQKEDALEVQDSENKDERLTAFPEQGSCETSGPVCFLK
EDQNQRPDFSSSNEREDEVPLQVQNSEVLLLPYKEESSSAGDITGIDGGDSSSVLGGGPE
ESEFDAFGGLFNEPEVVAGPAPRPSSSGDVEAGIIIRNISESDPDEVDDTDSPVSVESCL
AHFIKPELLSDENAWHCENCSKILQRQKKKAKEQEKTLSDGNASGSHDESWHASKACSFK
VSSTGNEDIENDKNIESSVSHVQHGTELENGQKDELRNCELQSSSLHQPNNEESCDNSAV
DSSITGNVQQDAPMLNNDDNDSEECSGKETGLESIRVNRDATKRVLIYRAPPVLTIHLKR
FSQDARGRLSKLNGHVNFRETMDLRPYMDPRCINEEEYKYQLVGVVEHSGTMRGGHYVAY
VRGGQRNREKVDNKENESSTWYHASDAYVRQVSLDEVLRCEAYILFYERN
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaaaataaaaaagaggggtcgaagttcagttaaggagaaggcggttattatc
gattcgtcgcccaaaattgttacagaatcatgtaacccgccaactactgagtctgttggt
gaggaggtttcagttgcaaaagagacaaatccttgtcctcatcttgttaaaggtattcaa
ttagatatattgtctggtaaggttgagtcttctgcacccataaggtgtgaaggctgcagg
gaaggtgcggctgataggaggggcggtaaaggaaaaggtaaacatgggaagaagaaagga
ggtgcagactcaaaatccgattcaaagtctatatgggtttgtttggagtgtggtcaatac
aactgtggaggtgtggggctacctataacccctaattgtcatgcaattgtgcattcaaag
aaagctcggcacccgttagtggttaatattgaaaaacctcaactgtgttggtgttttcgt
tgcaatatgcttattcaagttgataagcttgaaaccgatgaagcaagtcatgttatatct
gatgttgtgaaattgttaaaaggacgatcgtcaggaaaaactttagtagatgttgaggat
gtttccattggggatggcagtgtcacttcagaaattaagttaggatctctgtccacaagc
ggttcatatggacaaggtggttatgtggttcgaggcatggttaatcttgggaatacttgt
ttttttaattcaatcatgcaaaatctgcttgctatgaataaattgcgggacaatttccta
agggttgatgcttttgttgggccacttattagttcgttgaagaagttgttcactgaaaca
aacccagaatcaggattcaaaaacattatcaatccaagatccttttttggttgtgtatgt
tctaagtctcctcaattccgaggatatcagcaacatgacagtcatgaattgcttcgttgt
ttactggatggtttgagtactgaagaactggctggtaggaagcagaatggttctctcaag
agagatgggacctcttccaaaacattagttgatgctttatttggggggcagatatctagt
actgtatgttgcaatgaatgtgggcattcctcaacagtgtatgagccttttttagatctt
tccctccctgttccaaccaagaaacctccgcctcggaaggctcaaccagcacccagaacc
agaaagactaaacctccaccaaaaaaaggagcaaaatctcgagtcaaagttaacagggat
gttgatccgctacccgttcaaaatataccaagccaatcatcctgccttgatcagtctgtc
acatcaggtgctggggaattggtgatttcttctggtgtttctacggtattaggttctgaa
gaaataagcagcgaggccaaagttaacagggatgatgatccgttacctactcaaaatgta
ccaagccaatcatccagccatgaatcgtcttgccctgatcagtctgtcacatcagttgct
ggagaattggtggcttcttctggtgtttctacggtattgggttctgaagaaataagcagt
gaggccaataaagaggacttatctccatcaaatttggttaccgttgtagagtctcaacaa
attcaagggtttgacagtgttgcaactaaaacgtcagattcatcagatgcttttgcatgg
ttggattttgtggaagctgaaaccaatgaagaggacttatctccaccaaatttggttact
gttggagaatctcaacaaatgcaagggcttgacagtgttgcaaacaaaacctcagattca
tcagatgattttccatggttggattatgtggaagccgaaacaacgatagatgaatatgct
tccatatcccagaaggaagatgcactggaggtacaagactctgagaacaaggatgaacgt
ttgactgcattccctgaacaaggtagctgtgaaaccagtggtcctgtttgtttccttaag
gaggatcaaaaccaaaggcctgatttttcttcatcaaatgagcgggaagatgaggttcct
ttacaagttcaaaattcagaagtgctgttacttccatacaaagaagaaagttcctcagcc
ggagacatcactggaatagatggcggggactcctcgtctgttttgggtggtggtccagaa
gaatcagagtttgatgcctttggtggcttatttaatgagcctgaagttgttgctgggcct
gctcccaggccttcttcgtctggtgatgtggaagctggcattatcataagaaacatcagt
gaatctgatccagatgaagtagatgatacagattctccagtctctgtagagagttgtttg
gcacattttataaagcccgagcttctttcagatgaaaatgcttggcattgtgagaactgt
tcaaaaatcctccaacgtcagaagaagaaagcaaaagagcaggaaaaaaccctatctgat
ggaaatgcgagtggtagtcatgatgaatcgtggcatgcatctaaagcgtgttcttttaaa
gtcagtagtacaggaaatgaagatattgaaaatgacaagaatatagaaagttcagtttca
catgttcaacatggcacagagcttgaaaacggtcaaaaagatgagctgcgtaattgtgaa
ttacagtcttcaagtttacatcaacccaacaatgaagaaagctgtgataattcagctgtt
gattcttctattaccggaaacgtccaacaagatgctccaatgttaaataatgatgacaat
gactcagaagaatgcagtggcaaagagaccggcctagaaagcattagagtgaatagggat
gcaactaagagggtcctcatttatagagctccacctgtcttgaccattcatctgaagaga
ttcagccaagatgcacgtggtcgcttaagtaaattaaatggtcatgtcaacttcagagaa
acaatggatcttagaccatatatggatcccaggtgtattaatgaagaggagtataaatac
cagttggttggtgttgtggagcactcgggaaccatgagagggggtcactatgttgcttat
gtgagagggggccagaggaacagagagaaggttgataataaagaaaatgagagttccaca
tggtatcacgcgagtgatgcgtatgtgcgtcaagtttcccttgatgaagttcttcgctgt
gaggcatacattttgttttatgaaagaaattga
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