Medicago truncatula (barrel medic): 11436237
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Entry
11436237 CDS
T01716
Name
(RefSeq) chromatin assembly factor 1 subunit FAS2 isoform X1
KO
K10751
chromatin assembly factor 1 subunit B
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mtr03036
]
11436237
Chromosome and associated proteins [BR:
mtr03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
11436237
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
ANAPC4_WD40
WDR55
Beta-prop_WDR35_TULP_N
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_Vps41
B-prop_COPA_B_2nd
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_SPT8
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
Beta-prop_DCAF12
DPPIV_N
Motif
Other DBs
NCBI-GeneID:
11436237
NCBI-ProteinID:
XP_003630256
UniProt:
G7LE10
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Position
8:complement(43218074..43223481)
Genome browser
AA seq
600 aa
AA seq
DB search
MKGGTVQINWHESKPVLTLDFHPLSSTLATAGADFDIKLWSVKPSGSQKKLPVVTYLSSL
SYHSSAVNVIRFSSSGELLASGSDGGELLIWKLHSTDTGQTWKVLKILRSHVKDIMDLEW
STDGGYIISGSVDNSCIIWDVNKGTNLQTLDTHAHYVQGVAWDPLGKYIASLSSDRTCRI
YISKPHKSKGVERINYACKHVISKAEQPLLKNSKSNKYHLFHDETLPSFFRRLAWSPDGS
FLLVPAGSYKIGTASESVNAAYIFSRKDLSRPAIQLPCASKAVVAVRFCPVLFKLKGTNS
DGLFKLPYRVVFAVATLNSLYIYDTESTSPIAIFAGLHYAPVTDITWSPDAHYLAFSSQD
GFCSMVEFENDELGSPYCLSKENVLEDSKSTLQTANDAVLPTGSIGAVVAESMKMEVEEK
VDDMDIEASADIGAVTSESSKTVIQDKADDVIIKSTGNVDNRKNEAEHKADDMVIEEVTA
DIRKNEAEEKAADMIIATTGTANIGAALLDNRKTEDTENKLLSGLGSINSGAEEKASKQP
ANPDGKQSEAEEKADKPQSTSGSIKSEAAQKVGNQSSSSKSTPISNKPARKRITPIAIDP
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggtggaacggttcagattaattggcacgagagcaaacccgttttaaccctagat
tttcatcctctctcctccactctcgccaccgccggcgctgatttcgacatcaagttatgg
tcagttaaaccttctggatcacaaaagaagcttccagtagttacttacctcagtagtctc
tcgtatcatagttccgctgttaatgttattcgcttctcttcttccggggaattgttagct
tctggttctgatggaggtgaattgttaatatggaagctacattcaacggataccggccaa
acatggaaggttcttaagattttacgatctcatgtcaaggacattatggacctggagtgg
tctactgatggtggatatatcatatccggatcagttgataattcttgcattatatgggat
gttaacaaaggaactaaccttcagacgttggatacccatgcacactatgttcagggggta
gcatgggaccctttagggaagtatattgcttctcttagttctgaccggacttgccgaatt
tacatcagtaagccccataaatcaaagggtgttgagagaatcaattacgcttgcaagcat
gttatttctaaggcagaacagccattattaaagaattccaagtcgaataaatatcatctc
ttccatgatgaaacattgccctctttctttagaagattagcttggtctccagatggttca
tttctacttgtgcctgcaggttcttacaaaatcggtacagcgtctgaatctgtaaatgca
gcttacatattttctagaaaagatctttctcggcctgccatacagcttccgtgtgcaagc
aaagctgttgtagctgttcgattctgtcctgtattatttaagcttaagggaacaaattca
gatgggttatttaagctcccatatcgcgttgtatttgccgtggccacattgaattcattg
tacatttatgacactgagagcacttctccaatagcaatatttgctggccttcactatgct
ccagtaacagatattacctggtcacctgatgcccattatttagcattctcctcgcaagat
ggtttctgctctatggtggagttcgaaaatgacgaacttggatcaccttactgcttatca
aaagaaaatgtcttggaggacagtaaaagcacccttcagacagccaatgatgctgtactg
ccaactgggagtattggtgcagttgtagcagaaagcatgaaaatggaagtggaagaaaag
gttgatgacatggacatagaagcatctgcggatattggggcagtcacatcagaaagcagc
aaaactgtaatacaagataaggctgatgacgtgatcatcaaatcaactgggaatgttgac
aataggaaaaatgaagcagaacataaagctgatgatatggtcattgaagaagttacggca
gatattaggaaaaatgaagcagaggagaaggctgctgacatgatcattgcgacaactggg
actgcaaatattggagcagctctattagataatagaaaaaccgaagacacagaaaataaa
ctgcttagtggtttaggcagtattaattctggagccgaagagaaggcgtcgaaacaacca
gctaatccagatggtaaacaaagtgaagcagaagagaaggcagataaaccacaatcaact
tcgggcagcataaaatctgaggcagcacaaaaggtagggaatcaatcgtccagttcaaag
agcacacccatctcaaataagccagccaggaagcgcattacacctattgcaattgatcca
tga
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