Medicago truncatula (barrel medic): 11436468
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Entry
11436468 CDS
T01716
Name
(RefSeq) exosome complex exonuclease RRP46 homolog
KO
K12590
exosome complex component RRP46
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
11436468
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtr03019
]
11436468
Messenger RNA biogenesis [BR:
mtr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
11436468
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
11436468
NCBI-ProteinID:
XP_003623909
UniProt:
G7L3K7
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All DBs
Position
7:35756395..35759795
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AA seq
243 aa
AA seq
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MEIDRPDGRSPNQLRPLACSHSVLHRAHGSATWAQGETKVLAAVYGPKAGTKKNENPEKA
SIEVIWKPNTGHVGQADREYEMILKKTLESICIRTIYPNTTTSVIVQVVHDDGALLPCAI
NAACAALVDAGIPLRHLAVAICCSVTDNNSIILDPSKKEEEKSKAFAYLVFPNTTVSVVP
EKSSQVGNDPMAHGIITSVTHGAMSVDDYLHCLERGRATTQRLSEFLRKNIAPKSTREAS
KAG
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atggagatagacagacctgatggaaggagtcccaatcaattgaggccgctagcttgctct
cattctgtcctccaccgagcccatggctcagccacatgggctcaaggagaaaccaaagtt
ctggctgcagtttatggacctaaagctggaaccaagaagaatgaaaatccagaaaaagcc
tccattgaagttatttggaagcctaatacaggacacgttggtcaagcggatagggagtat
gaaatgatattgaagaaaaccttggaaagcatatgcattcgtaccatatatcccaacacc
accacttctgttatagtccaggttgtccatgacgatggtgctcttcttccatgtgcaata
aacgcagcatgcgctgcacttgtggatgccggaatacccctaagacatctggctgttgca
atatgttgttctgtaacagataataattctattatattggacccttccaaaaaagaagag
gagaaatcaaaagcatttgcctatttagtttttccaaatacaactgtttctgtcgtccca
gagaaatcatcgcaggtgggtaatgatcccatggcacatggaatcatcacatctgttaca
catggtgctatgtcagtggacgattaccttcattgcctagaacgaggacgagccacaact
caaaggttgtctgaatttttgaggaagaatatagcaccgaaatctacccgtgaggcatct
aaagctggatga
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