Medicago truncatula (barrel medic): 11436735
Help
Entry
11436735 CDS
T01716
Name
(RefSeq) DNA mismatch repair protein MSH7 isoform X1
KO
K08737
DNA mismatch repair protein MSH6
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
11436735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mtr03400
]
11436735
DNA repair and recombination proteins [BR:
mtr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
11436735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_I
MutS_III
MutS_II
AAA_29
Motif
Other DBs
NCBI-GeneID:
11436735
NCBI-ProteinID:
XP_003620513
UniProt:
G7KNH7
LinkDB
All DBs
Position
6:complement(39778366..39787493)
Genome browser
AA seq
1155 aa
AA seq
DB search
MIRQKSILSFFHKTSPENRTSAAAKTTAPSAPQSNPEDRTIKPVVNPPPPSDDVRGTDTP
PEKVPRQVLPANYVANTKNSGSCLFESIMHKFIKVDDGEKVNQRSQSSNPDSFPKPSPSS
NIFTDTNRKGLQKEVAAAFEPLVKAKDNAVNFKEKVSHDNTFRSQSSNHDSFPRPSPPSS
IFTNTNRKGLQRDAAAFEPVVKAKDNAVNFKQKVNSGNTFLFENDDDITGPETPGMQPLT
SNVKRKVEDVSKLSSLRDSGKRVRFLDDSISLDMTKKELEIASKFEWLDPSRIRDANGRR
PDDPLYDRTTLYIPPEVLRKMTASQKQYWSVKCKYMDVLLFFKVGKFYELYEMDAEIGHK
ELDWKITLSGVGKCRQVGISESGIDDAVKNLVARGYKVGRVEQLETSEEAKARGANSVIQ
RKLVQVVTPSTNVDGNIGPDANHLLAIKEESNGSDNGSVTYGFAFVDCARLRLWVGSIDD
DASCSALGALLMQVSPKEIIYERRGVSKEAEKAFRKFSLNGSTTLQLTPMRSITDLVTSE
ISDLIHSKGYFKGSSNSLDHVLTNVIHCEITLSALGGLIGHLNRLMLDEVLQNGDIYPYQ
VYKGCLKMDGPTYINLEIFGNSNDGGKAGTLYKYLDNCVTSSGKRLLRNWICCPLKDAEG
INNRLDVVDHLIASPVIVSHIAQHLRKLPDLELLLGRTKSSLKVSSPILLPLLVKKILKQ
RVKVFGSLVKGLRTTLSLLLILQKEQPLISSLTKVFKLPVLTGSDGLDQFLTQFEAAVDS
DFPNYQNHDVTDTDAETLTILAELFLEKANQWFEVVHAINCIDVLRSFAVTSSFSCGTMS
RPVIVPTSKSTSKDSGAPVLKMKGLWHPFALGETGREPVPNDMILGENEGGHHPRTLLLT
GPNMGGKSTLLRATCLAVIMAQLGCYVPCENCVLSVVDIIFTRLGATDRIMAGESTFFIE
CTETASVLHNATQDSLVILDELGRGTSTFDGYAIAYAVFRHLIEKVNCRLLFATHYHPLT
KEFASHPRVTMQHMACAFKSKSDTLSKQDQELVFLYRLAPGACPESYGLQVALMAGIPEK
TVNVASKASQQMKISIGKNFRSSEQRSEFSSLHEEWLKTLMSIARIEDVESFDDDVLDTL
VCLRYELKSSFKSGN
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgattcgccaaaaatcaattctctcattcttccataaaacctcgccggaaaatcgcact
tccgccgccgcaaaaaccaccgctccatccgctccgcaatccaaccccgaagatcgtact
atcaaaccagtcgtcaatccaccgccgccgtcagatgacgtcagaggaactgacactccg
ccggagaaggtgccgcgtcaggttttaccggctaactacgtggcgaacacgaagaactca
ggttcttgtttgtttgagagtatcatgcataagtttattaaggtcgatgatggcgaaaag
gttaaccagaggagccagtcatcaaatcctgatagcttccccaaaccatctccatcatca
aatatatttaccgatactaaccggaaaggactgcagaaagaagtagcagcagcttttgaa
cctttggtgaaagccaaagataatgctgtaaatttcaaagaaaaagttagtcatgataat
acgttcaggagccagtcatcaaatcatgatagcttccccagaccgtctccaccatcttct
atatttactaatactaaccggaaagggctgcagagagatgcagcagcttttgaacctgtg
gtgaaagcgaaagataatgctgtaaattttaaacaaaaggttaacagtggaaacacgttc
ctgtttgaaaatgatgatgatattactggaccagaaaccccaggaatgcaacctcttact
tctaatgtaaagcgaaaagtagaggatgtgtccaagctttcttccttgcgggattcgggc
aaacgagtcagattccttgatgattcaatatcactggacatgaccaagaaggagttagaa
atagctagcaagtttgagtggcttgatccttctcgaatcagggatgcaaatggaagaagg
cccgatgatccgttatacgacagaactacactttatatacctcctgaggttttgagaaaa
atgactgcatcgcagaaacagtattggagtgtcaaatgtaaatatatggatgttttgctg
ttctttaaagtgggaaaattttatgagctttatgaaatggatgctgaaattggccataag
gagctcgattggaaaataacattaagtggtgtgggaaaatgtcggcaggttggtatatct
gaaagtgggattgatgatgctgttaaaaacctggttgctcgtggatataaggttgggcga
gtggagcaattggagacatctgaagaagcaaaagctagaggagctaattctgttattcaa
agaaaattagttcaggtagtcaccccatcaaccaatgtggatggtaatattggccctgat
gcaaaccatcttcttgcaataaaagaggaaagcaatggctcggataatggttcagttaca
tatggatttgcttttgttgattgtgctcgtcttaggttatgggttggttctattgatgat
gatgcgtcatgttctgctttgggggctttattgatgcaagtgtcacccaaggaaattata
tatgaacgcagaggggtatccaaagaagctgagaaagcatttagaaaattctctttaaat
ggttccacaacactacaattgactcctatgcggtcgatcactgacttggtgacctcagaa
attagtgatttaattcactcgaaaggatactttaagggttcgtctaattcactggatcat
gtgctgaccaatgtgattcactgtgaaatcacgttatctgctcttggtggactgataggt
catctgaatagattgatgctagatgaggtccttcagaacggggacatttatccataccag
gtttataagggttgcctcaaaatggatggtccaacctatataaatctagaaatctttggc
aatagcaacgatggtggaaaagcaggtacattgtacaagtatcttgataactgtgttact
tcatctggaaagcggcttcttaggaactggatctgttgtccattgaaagatgctgaagga
attaataataggcttgatgtggtagaccatctaatagcttcccctgtaattgtgtctcat
attgcacaacatcttcgtaagcttccagatttggaactattacttggccgaaccaagtcc
agcctaaaagtatcaagccctatcttactgcccttgttggtaaagaaaatattgaaacag
agggtgaaagtgtttgggtcacttgtgaaaggccttcggactactctgagtttgttgctt
atactacagaaagagcagcctctaatatcatccttgaccaaagttttcaaacttccagtt
cttactggaagcgatgggctcgatcaatttcttactcagtttgaagcagctgtagatagt
gatttcccaaattaccaaaatcatgatgttacggatacagacgccgaaacactcacaata
cttgctgaactatttttggagaaagctaatcaatggtttgaagttgttcacgccatcaat
tgcattgatgtactaagatcttttgctgttacttccagcttttcatgtggaactatgtct
aggcctgttatagtgccaacatcaaaaagtacaagtaaagatagtggagcacctgtgctc
aaaatgaagggactgtggcatccatttgctcttggagagactggacgtgagcctgttcca
aatgacatgatccttggcgagaatgaaggtgggcatcatcctcgcacattgcttctgaca
gggccaaacatgggtggaaaatcaacacttttgcgtgctacctgtctagctgttattatg
gcccagttaggatgctatgtgccgtgcgaaaattgtgttctttcagttgtggatatcatc
ttcacacgccttggagccacagatagaatcatggcaggcgagagtaccttctttattgag
tgtacagaaactgcatcagtgcttcataatgctactcaagattctcttgttatccttgat
gaattgggtcggggaacaagcacttttgatggctacgccattgcatatgctgtattccgg
catctgattgaaaaggttaactgtcgattgctatttgcaacgcattaccatccgctaaca
aaagaatttgcatctcatccacgcgttacaatgcaacacatggcttgtgctttcaagtca
aaatctgataccctttccaaacaagatcaggaactagttttcctataccggcttgccccc
ggggcatgtccagagagctacggattgcaggttgcacttatggctggaatcccagaaaaa
actgtgaacgttgcttcaaaggcaagccagcagatgaaaatatcaattggcaaaaacttt
aggtcaagtgaacagagatcagagttttcatctcttcacgaagaatggctgaagaccttg
atgtctatcgcaagaatagaggatgttgaatcttttgatgatgatgttttagatacatta
gtctgtttgcggtatgaactaaagtcttcgtttaaatcaggtaactag
DBGET
integrated database retrieval system
