Medicago truncatula (barrel medic): 11436875
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Entry
11436875 CDS
T01716
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 10
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
11436875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mtr04121
]
11436875
Enzymes [BR:
mtr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
11436875
Ubiquitin system [BR:
mtr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
11436875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Sina_ZnF
Rad60-SLD
Sina_RING
Plexin_RBD
Ubiquitin_2
zf-RING_14
TUG-UBL1
S_4TM
Motif
Other DBs
NCBI-GeneID:
11436875
NCBI-ProteinID:
XP_003616125
UniProt:
G7KFP6
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All DBs
Position
5:complement(33850831..33853793)
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AA seq
340 aa
AA seq
DB search
METCNKENEEIVDSAEGVNKNSSVKVMISFPKDFECCICLQPSSSIPVFQCDNDHIVCST
CFPQLMNNCHKCSMPISSKCCKVIENISQSIQMPCPNKKYGCRETISQSGKRKHEEECIY
VPCYCPVKGCDFVASLEVLSNHFNHKHGDSLIEFSYGHSFTVSLNSNDEAAVLQEENDGK
LFTLNNSTMLLGNAVNISCIDVNSSEAGYSYDILARSKTSRLKFHSSPKNIQRSTSATHS
SEYLMIPFGYFGSSKPLELEICITPKMQIFIAHGCGKMTPLKVESSDTIANVKDKILDKE
TIPVHQQRLMFANKLLDDSHTLAYYNIQEKATLHLILRLP
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggagacatgcaacaaagaaaacgaagagatcgttgattccgcagaaggtgttaataag
aatagttccgtcaaagtgatgatttccttcccaaaagatttcgagtgctgcatttgtctt
caaccatcgtcaagtattccggtctttcagtgcgataatgatcatattgtttgctctact
tgctttcctcaacttatgaacaactgtcacaagtgctcaatgcccattagctcaaaatgt
tgcaaagtcattgagaatatatcgcaatctatccaaatgccatgcccgaacaaaaaatat
ggctgcagggagacaataagtcaaagtggaaagaggaaacatgaagaagaatgcatctat
gtgccatgttactgtcccgttaaaggttgtgattttgttgcctcattagaagtgttgtcc
aaccatttcaaccataaacacggggactctctaatcgaattttcttatggtcactccttc
actgtctcgttgaattctaatgatgaagctgctgttcttcaagaggaaaatgatgggaaa
ctatttactctcaataatagtactatgcttctgggaaatgcagtcaatattagctgcatt
gatgtcaactcttctgaagccggttatagttatgatatattggctaggtctaagacatcc
cgtctgaagttccattcttctccgaagaatatccaacggtctacttcagcaactcattca
tcagagtatctcatgattccatttggttattttggttcttctaaaccactcgagctagaa
atttgcataacccccaagatgcaaatattcatagcacatggttgtggaaagatgaccccc
ttgaaggtggagagttcagacacgatagcaaatgtgaaggataagattcttgacaaggaa
acgatcccagtgcaccaacaacgtctgatgtttgccaataagctactagatgacagccat
acccttgcctattacaacatccaagagaaggcaaccctccacctcatcctccgcctcccc
tag
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integrated database retrieval system
