Medicago truncatula (barrel medic): 11436948
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Entry
11436948 CDS
T01716
Name
(RefSeq) DNA mismatch repair protein MSH4 isoform X1
KO
K08740
DNA mismatch repair protein MSH4
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mtr03036
]
11436948
Chromosome and associated proteins [BR:
mtr03036
]
Eukaryotic type
Meiosis-specific proteins
Others
11436948
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GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
DNA_primase_S
AAA_29
Motif
Other DBs
NCBI-GeneID:
11436948
NCBI-ProteinID:
XP_003611337
UniProt:
G7JXD8
LinkDB
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Position
5:3987512..3997274
Genome browser
AA seq
792 aa
AA seq
DB search
MENDGGEGSSFLVSIIENRAKEVGLAAFDLRSASLHLSQYIETSSSYQNTKTLLHFYDPI
VIIVPPNKSASSSTSTVTELVDRFYGSVKKVVLARGCFDDTKGAILIKNLAAKDPSALGL
DTYYKQYYLCLAAAAATLKWIETEKGVVITNHSLSVTFNGSFDHMNIDATSVQNLEIIEP
FHSALLGTSNKKRSLFHMLKTTKTIGGTRLLRANLLQPLKDIKTINARLDCLDELMNNEQ
LFFALCQFLRKFPKETDRVLCHFCFKPKKVTIEAISVDRSKKSQVLVSSVILLKTALDAL
PLLSMALKDAKSSLLSNIYKSVCENEKYDLIKKRIEEIIDEDVLHARVPFVACTQQCFAV
KAGIDGLLDISRKSFCETSEAIHNLANNYREDFKLPNLKLTFKNRQGFHFVIPQKNIQGK
LPNKFIQVVKHGNNIHCSTLELASLNARNKSAAAECYTRTEVCLEELMDAIRENVSALTL
LAEILCLLDMIVNSFAHMISTKPVDQYTRPEFTENGPMAIDSGRHPILESIHNDFVANNI
FLSEASNMAIVTGPNMSGKSTYLQQVCLIVIIAQVGCYVPARFSTLRVVDRVFTRMGAVD
NLESNSSTFMTEMKETAFIMQNVSERSLIVMDELGRATSSSDGFAIAWSCCEHLLSLKAY
TIFATHMENIAELATIYPNVKILHFHVELKNNHLEFKFQLKEGPKHIPHYGLLLAEVAGL
PTSVIETARMITLRISEKEKKRMDVNCLQNHSIQSAYHVAQRLLCLKYSNQDEDTIRQAL
RNLKEHCIKQKL
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacgacggtggagaaggttcaagcttccttgtcagcatcattgaaaacagagct
aaggaggttggattagcggcttttgatttgaggtctgcttcactgcacctttcacaatat
attgaaaccagtagttcatatcaaaacacaaagacattactgcatttctatgatcccatt
gtgatcatcgttcctccaaacaagtcagcctccagttctacaagtacagttactgaattg
gttgatagattttatggttcagtcaagaaggtagtgttggcccgtggttgttttgatgac
acaaagggagctatcttaataaaaaacctagcagccaaggatccttcagcacttggtttg
gacacttattacaagcagtattatctgtgcttggctgccgctgccgctactttaaagtgg
attgaaacagaaaaaggggtggttattaccaatcactcattgtcggtcacctttaatgga
tcctttgatcacatgaatattgatgcaaccagtgtccaaaacttggaaattattgagcca
tttcattctgccctactgggaacaagcaacaaaaagagaagtctatttcacatgctcaag
acaactaaaactattggagggactaggctccttcgtgccaatttgttgcagcctctaaaa
gacatcaaaacaatcaacgctcgtcttgattgcctagatgaactgatgaacaatgaacaa
ctgttttttgccctctgtcagtttttgcgtaaatttccaaaagagactgatagagtatta
tgccacttctgctttaagccaaagaaagttacaattgaggctatatcagttgatcgttct
aaaaagagtcaagtgctggtatcgagtgtaatcctccttaaaactgctttagatgccctt
ccattactttctatggcgcttaaggatgccaaaagttcccttctttcaaatatctacaag
tctgtttgtgaaaatgaaaaatatgatcttattaagaaaagaatagaagaaattattgat
gaagatgtgcttcatgcacgggttccttttgttgcctgcactcagcaatgctttgctgtt
aaggctggaattgacggtctcttggatatttcacgaaaatcattttgtgaaaccagtgaa
gctatccacaatcttgcaaacaattatcgagaggatttcaagttgccaaatttaaagctt
acatttaaaaacagacagggatttcattttgttataccacagaagaatattcaaggaaag
cttccaaacaagttcattcaggttgtaaaacacgggaacaacattcattgctcaactttg
gaactagcatctttgaatgctaggaataaatctgcagctgcagaatgctatacaagaaca
gaggtttgcctcgaagaactaatggatgcgattcgtgagaatgtctctgcgttgacactg
ctagctgaaatcttgtgcttgttagacatgattgtgaactcttttgctcatatgatttcg
actaagcccgtggatcaatatacaagaccagaatttacggagaatgggccaatggcaatt
gattctggtagacacccaatcttggagagcatacacaatgattttgttgccaacaatata
tttctgtctgaagcctcaaacatggcgattgtgacaggccctaatatgagcggaaagagt
acttaccttcaacaagtgtgtctcatagttatcattgctcaagttgggtgttacgttcct
gcccgcttctcaactcttagggtagttgaccgtgttttcacaaggatgggtgcagttgat
aatcttgaatcaaactctagcacgttcatgacagagatgaaagagacagcttttatcatg
cagaatgtttcagagaggagtttgattgttatggatgaacttggtagggctacttcttca
tctgatgggtttgcaatagcttggagttgctgcgagcatcttttgtcactaaaagcgtat
acgatatttgccactcatatggagaatatagcggaattagcaacaatctatcccaacgtg
aaaattctccactttcatgtcgaattaaaaaacaaccatttggagttcaagtttcaactt
aaggaaggaccgaaacatatcccccattatggccttctcttagcagaagtggcaggatta
ccaacctccgttattgagaccgccagaatgatcacattaaggatttcagaaaaggaaaag
aaaaggatggatgtcaactgcttgcagaatcactcaatacagagtgcttatcatgttgcg
caaaggttgttatgcctgaaatattccaatcaagacgaggatacaattcggcaagctttg
cggaatctcaaggagcactgcatcaagcaaaagctttaa
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