Medicago truncatula (barrel medic): 11436961
Help
Entry
11436961 CDS
T01716
Name
(RefSeq) transcription factor IIIB 60 kDa subunit isoform X1
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mtr03021
]
11436961
Transcription machinery [BR:
mtr03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
11436961
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Motif
Other DBs
NCBI-GeneID:
11436961
NCBI-ProteinID:
XP_024625179
LinkDB
All DBs
Position
7:40486897..40502145
Genome browser
AA seq
575 aa
AA seq
DB search
MVYCDHCVKNVRAELHEECYLVCTSCGKVLEDQILTEEPTFTKNSAGQSKISGNLVKAVE
ELDASRKRTLYRASKEMEYLSLSLGVSEGDVVRQARAFYEIALAKNFTRGRKSEQVRAAC
LYLAFRQNKKPYFLIEFSNNLRINVYELGGVYLQLCEVLRLDNHPIVKKPIDPSLYLHKY
TSNLLGHRNGVVSATALNIIAQMNRDWLQTGRKPGGLFAAALYTSANAHGHKVSKRDILR
LFHICEQTMNKRLIEYEMTDSSNLTVEELNAMAKENEKNPVVMPNSKFNGSTSTPLVCEH
KEMEVPHFALGLCETCYKDFDKVSGGFGGGLDPPAFQRAEQERVKKTNSKENADVVKASN
SACKGQKEDFPASVLERDDTSTEAQDESGNFSDIDDQEVDAFLFNEEEKSYRKIIWENQN
REYLEEQAAKEAAAAAQKKIYEANLENCPVESRELYESTTASVAKTRKEKQRRAQQAKKS
GPAQSAVEAACQMVKRKGLSNKVNMDNFAKLFEDKPADERNPKKVRFDLASDNHDDELGS
ADYFEDGDNDWYNNENMDESYFPEEDGYNYDEGYY
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggtttactgcgatcattgcgtcaaaaacgttcgcgctgagctacacgaagaatgttac
ttggtttgtacttcttgtgggaaagtgttggaagatcagattttaactgaggagcccact
tttactaaaaactccgccggacagagcaaaatatcgggaaatttggtaaaagcagttgag
gagttagatgcttcacgtaaaaggactttatatagagcttctaaggaaatggaatattta
agtctcagccttggagtaagtgagggagatgtggtccgccaagctagggccttctatgaa
atagcacttgcaaaaaatttcacccgaggacgtaaatcagagcaagtacgggctgcgtgt
ctttatcttgcattccggcaaaataaaaagccatactttcttattgagttttcaaacaat
ttaaggataaatgtttatgagcttggaggagtttatttgcagctttgtgaagtgttaagg
cttgacaatcatccaattgttaaaaagcctatcgatccttctctttatcttcataaatat
actagtaatttgcttggccatagaaatggggttgtctctgcaactgcactgaacattatt
gcgcaaatgaaccgtgactggttgcagacagggaggaaacctggtggattatttgctgct
gcattatacacctctgctaatgcacatggtcataaagtctccaagcgagatattctaaga
ctcttccatatatgcgagcaaacgatgaataagcgattgatagaatatgagatgacagac
tcttctaacttgacagttgaggagttgaatgcaatggcaaaagagaatgaaaaaaatccg
gttgtaatgccaaacagtaaattcaatggatctacttcaacccctctagtgtgtgagcac
aaagaaatggaagtgccccattttgcacttggactatgtgaaacttgttacaaggatttt
gataaggtctcgggaggatttggtggtggtttggaccctcctgcattccagcgagctgaa
caagagagagtcaagaaaacaaattctaaggaaaatgcagatgtggtgaaggcatcaaat
agcgcatgcaagggacagaaagaagattttcctgcctctgttctagaaagggatgacact
agtacggaagctcaagatgaatcaggaaatttctctgatattgatgaccaagaggttgat
gcgttccttttcaatgaggaagagaagtcgtacaggaagataatatgggaaaatcagaac
cgcgagtatcttgaggagcaagcagccaaggaagcagctgcagcagctcaaaagaaaatt
tatgaagcaaatttggaaaattgtcctgtagaatcaagagagctttatgaatccaccaca
gcttctgtggcaaaaacaagaaaggaaaagcagagacgagctcaacaagcaaaaaaatca
gggcctgctcaatctgctgtagaggctgcttgccaaatggtgaaaagaaaggggctcagt
aacaaagtcaatatggataactttgcaaaattatttgaagacaaaccagcagatgaacgt
aatcccaagaaagtaagatttgatctagcctctgataatcacgatgatgagctgggatca
gcggattatttcgaggatggtgacaatgattggtataataatgaaaatatggatgaatca
tatttccctgaagaagatggttataattatgatgagggttattactga
DBGET
integrated database retrieval system
