Medicago truncatula (barrel medic): 11437147
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Entry
11437147 CDS
T01716
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic
KO
K05391
cyclic nucleotide gated channel, plant
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
11437147
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mtr04040
]
11437147
Ion channels [BR:
mtr04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
11437147
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
11437147
NCBI-ProteinID:
XP_024638983
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Position
5:1448457..1454183
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AA seq
742 aa
AA seq
DB search
MNHFDKGEIPILSESTCAQRSNEPQDSTFRRNISSTPSASISNLVGHTGPLHTARKTPVY
RMSGPLYATPATGNPFQNSIIVAGNKVGENNIEKLSTFDGTDKNEHLLRSGQLGMCNDPY
CTTCPTSFKVAHQKKPRASTIFDPKFHNSLYGDAKGYGRKVYSFCSSCIPGVMNPHTKIV
QQWNKFLAIFCLLAIFVDPLFFFLLYDNKCIQINWTMATTLVLLRSIFDVVYLLNILLQF
RLAYVSPESRVVGAGDLVDHPKKIAVNYFKSYFFLDLFVVSPIPQIMIMFILPNSLGSSG
ANYAKNLLRLGILVQYIPRLFRFLPLLIGQSPTGFIFESAWANFIINLLIFMLSGHVVGS
CWYLFGLQRVNQCLRDACRNANLTGCMELIDCNSNATWRNDKGANDCLNSSSGVFSYGIY
ANAVPLTIETRVISKYVYALFWGFQQISTMAGNQVPSYFVWEVLFTMSIIGLGLLLYALL
IGNIQNFLQALGRRRVEMQLRGRDVEQWMSHRRLPEDLKRRVREAERYTWAATRGVPEEM
ALENLPEDLQKDIRRHLFKFVKKVRIFSMMDEDEPILDAIRERLIQTTYIKGSRILSQGG
LVQKMVFIVRGKLESIGEDGIPVPLSEGDACGEELLRWYLEQSVESKEGKKVKLQGQGLT
SDRTVRCLTNVEAFSLRAKDIEEVTTLFARFLRSPRVQGVIRYESTYWRSLAANRIRVAW
RYRKKRLSRANTRQNDYQTLMS
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgaatcattttgataaaggtgaaattccaattctgtcagaaagtacatgtgcacaacga
tctaatgaacctcaggattctaccttccgaagaaacatatcaagcacaccaagtgcttca
atatcgaatcttgtcggacatactggtccgcttcataccgcgaggaaaactcctgtttac
cgaatgagtggtccactgtatgctactcctgcaactgggaatccttttcagaatagtata
atagtggcaggaaacaaagtaggggagaacaacatagaaaagttatctacatttgatggc
acggataaaaatgaacacttgttgaggtctggacaactaggaatgtgtaatgatccttat
tgtactacttgccctacttccttcaaagttgctcaccaaaaaaaaccaagagcttccact
atatttgatcccaagttccacaattctctttatggcgacgccaaaggttatggacgaaaa
gtttattctttctgctcttcatgtattcctggagtgatgaaccctcacacaaaaattgta
cagcaatggaacaagtttttggccatattttgcctgctcgcaatttttgttgatccctta
tttttcttcttactttatgataataaatgtattcaaatcaactggacaatggcaacaaca
cttgttttacttagaagcatatttgatgttgtgtatctcctgaacattcttcttcagttt
aggttggcttatgtttctcctgagtcaagggttgttggtgctggggatttagtcgaccat
cccaagaaaatagctgttaattactttaagagctactttttcttggacttatttgttgta
tcacctattcctcagataatgataatgtttatcctaccaaattccttggggtcatcagga
gcaaattatgcaaaaaatcttctacgactagggatccttgtacaatatattccaagatta
ttcagatttttgcctctgctaattggtcagtctccaaccggattcatattcgaatcagcc
tgggcaaatttcattattaatcttctcatttttatgctatccggccatgttgttggttca
tgctggtacctctttggcttacagagggttaaccaatgtttgcgtgatgcctgccgtaat
gctaatctaactggatgcatggaattgattgattgtaattctaatgctacatggaggaat
gataagggtgccaatgattgtttgaattcctcatctggtgttttttcttatggaatctat
gccaatgctgtaccacttacgatagaaactagggtgatcagcaaatatgtgtatgcactg
ttttggggattccagcaaatcagtactatggctggtaatcaagtaccaagctattttgtg
tgggaagttctctttacaatgtccatcataggattgggactcttgctttatgcgcttctc
attggaaacatacagaactttcttcaggctcttggacggaggagggtagaaatgcaactt
agaggtcgtgatgttgagcaatggatgagtcatcgccgcttaccagaagatcttaagagg
agagtacgggaggctgaacggtatacttgggctgcaacaaggggcgttcctgaggaaatg
gctctagaaaatttgccagaagatctccagaaagacattagacgccatctcttcaaattt
gtaaaaaaagttcgaatattttccatgatggacgaggatgaacctatcttagatgccatt
cgtgagagactaatacagacgacatacattaaaggaagtagaattctgagtcagggtggt
ctcgtacaaaagatggtgtttattgtgcgtggaaagttggagagcatcggagaagatgga
attccggttccattatcagaaggggatgcttgtggtgaagaacttctaagatggtatctt
gaacagtctgttgaaagcaaagaaggtaaaaaagtaaagcttcaaggacaaggattgact
agtgacagaacagtaagatgcttaaccaatgttgaggcattttcactccgcgctaaagac
attgaagaagtgaccactcttttcgcaagattcttgcggagccctcgtgttcaaggagtt
ataaggtatgaatccacatattggagatcacttgcagcaaacagaattcgggttgcatgg
agatacaggaagaagcgtctaagtcgagctaataccagacaaaatgattatcaaacattg
atgtcatag
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