Medicago truncatula (barrel medic): 11437293
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Entry
11437293 CDS
T01716
Name
(RefSeq) DNA topoisomerase 3-beta isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03440
Homologous recombination
mtr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
11437293
03460 Fanconi anemia pathway
11437293
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mtr03032
]
11437293
03400 DNA repair and recombination proteins [BR:
mtr03400
]
11437293
Enzymes [BR:
mtr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
11437293
DNA replication proteins [BR:
mtr03032
]
Eukaryotic type
DNA Topoisomerases
11437293
DNA repair and recombination proteins [BR:
mtr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
11437293
FA (Fanconi anemia) pathway
11437293
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Toprim
Motif
Other DBs
NCBI-GeneID:
11437293
NCBI-ProteinID:
XP_003601731
UniProt:
G7JBC7
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All DBs
Position
3:41744882..41756396
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AA seq
860 aa
AA seq
DB search
MALPKVLMVAEKPSIALSIATVLSHGKMNTRRGSTEVHEFDGKFRKAPARFKVTSVIGHV
FSVDFPGKYQDWAATDPLDLFQAQVIKNESNPKAHICKHLHQEARGCRYLVLWLDCDREG
ENICFEVIESTGFNINDVYRARFSSVTEKDVLNALDNLVRPNRDEAMAVDARQEIDLKVG
VAFTRFQTSFFQGKYGNLDARVISYGPCQTPTLGFCVQRYLQINTFKPEKFWSLQPYIIQ
SGYEILLEWQRSKLFDINVAMMFQKLVADDGIVEVTNISEKPETKGRPVGLNTVNLLKVA
SSALGFGPQMAMQLAERLYTQGFISYPRTESTAYPPSFDFRSALSAQRNNPTWGNYVEGL
LASGYQKPRSGTDVGDHPPITPMKSASEDMLGNDAWKLYQYICQYFIGTVSPDCKYIRKK
VEFQVGGESFHCTGQHVITKGFTAIMPWLAINDKSLPSFEEGQKIKLSKVELYEGSTTPP
DFLTESELISLMEKNGIGTDASIPVHINNICERNYVQVQAGRKLSPTTLGITLVRGYQSI
DPDLCLPDIRSFIEQQITLIAKGQVDHHRVVQHVIEQFKQKFCYFVKKIEAMDALFEAQF
SALVDSGRIMSKCGKCLRYMKYISVQPSRLYCGTCEEVYDLPQKGTIKLYKELTCPLDNF
ELLICSMPGPEGKSFPLCPYCYSNPPFEGIDTLINSAKTTTSSKTGKGAGMPCNLCPHPT
CPNSLVSQGVCACPECSGTLVLDPVSAPKWRLCCNMCNCLVFLAQGAHRISTTKERCPEC
DSSILEVDFNKKTTPLADGSTLHRGCILCDVLLHSLVEMKYGRGFKSSRGRGRGGRTQRY
RGRGRGNAKMMDPKMSFRDF
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttcccaaagttctgatggtcgccgagaagcctagcatcgctctttccatcgcc
accgttctctctcacggcaagatgaatacacgaagaggaagcactgaagttcacgaattc
gacgggaagtttcgcaaagcgcctgcgcgttttaaagtcacttcagttattggacatgta
ttcagtgtagattttcctggtaaatatcaagattgggcggccacagatcccttggatctt
tttcaagctcaggttataaagaatgaatcaaatccaaaggcgcatatttgtaaacattta
catcaagaagctcgtggatgtcgttatttggtattgtggttggattgtgaccgtgaagga
gaaaatatatgttttgaggttatagaatcaactggtttcaatataaatgatgtctatcgt
gcacggttttcttctgttaccgagaaagatgtcctgaatgctctagacaaccttgtcaga
cccaacagggacgaagcaatggctgtagatgctaggcaagagatagatttgaaagttgga
gttgcctttactcgatttcagacgagttttttccagggaaaatatgggaacctagatgcc
agagtcatctcctatggaccctgtcagactccaactttaggattttgtgtgcaacggtat
ttgcaaataaatactttcaagccagaaaagttttggagtttgcaaccttacataattcag
agtggctatgaaattctgctagaatggcaacgcagcaaattgtttgacataaatgttgct
atgatgtttcagaagctggttgctgatgatggaattgtggaagtgactaacatatcagaa
aaaccggaaaccaaaggtcgccctgttggtctaaatacagtgaatcttctgaaggttgct
tcaagtgctctaggatttggtcctcagatggctatgcagctagctgaacgattgtatact
caaggcttcatcagctatccacgaacagaaagcaccgcataccctccgtcatttgacttt
cgtagtgctctctctgcacaaagaaataatccaacttggggtaactacgtagaagggcta
ctcgccagcggttatcagaaacctcgatcgggaacagatgtgggtgaccatcctcccatt
actccaatgaaatctgcatcagaggatatgctaggtaatgatgcttggaagctgtaccag
tatatctgccaatacttcatagggacagtgtctccggactgcaagtatataaggaaaaag
gtcgagtttcaagttggtggagagtcctttcattgtacagggcagcatgttatcaccaaa
ggctttacagctattatgccttggttggcaataaatgataaaagtcttccatcgtttgaa
gaagggcagaaaataaaattatcaaaagttgagctctatgaagggagtaccacacctcca
gattttcttactgaaagtgagctgatctctctaatggagaagaatggaataggaacagat
gcatcaattcctgtacatatcaacaatatatgtgagcggaattatgtgcaggtacaagct
ggccggaagctttccccaaccacattaggtataactttggtaagaggttatcaatcaatt
gatccagacctctgcctgcccgatatccgtagctttattgagcaacaaattactcttatt
gctaagggtcaggtagatcatcaccgtgtagtgcagcatgtaattgaacagttcaaacag
aagttttgttactttgtcaaaaagattgaagccatggatgcattatttgaagcacaattt
tctgcacttgttgattcagggcgtattatgagtaaatgtggtaaatgcttgcgatatatg
aagtatatatctgttcagccatcacgtttgtattgtggtacatgtgaggaggtttatgat
cttccacagaagggtacaataaagctgtacaaggaactgacttgtcctttagacaatttt
gagcttttgatctgctccatgccaggcccggaaggtaaatcattcccactatgcccttat
tgctacagcaatcccccatttgaaggcatcgacacactcatcaattcagctaaaactact
acttctagcaagactggcaagggagctggcatgccatgcaacctatgcccccatcccact
tgcccaaattccttagtttcccagggtgtatgtgcttgcccagaatgcagtgggacactt
gtcttagaccctgtaagtgctcccaaatggcgactttgttgcaatatgtgcaattgccta
gtttttcttgcacagggtgctcatagaatctcgacaactaaagaacggtgccctgaatgt
gactcttcaatcttagaagtggacttcaacaagaaaacaactcctctggcagacgggtct
acgttacaccgtggttgcattctttgtgatgtattactacattcccttgtggagatgaaa
tatgggagaggcttcaagagttcaaggggaagaggtagaggaggaagaactcaaagatat
cggggcagaggacgtgggaatgcaaaaatgatggatccaaaaatgagtttccgagatttc
taa
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