Medicago truncatula (barrel medic): 11437356
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Entry
11437356 CDS
T01716
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13 isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mtr03021
]
11437356
Transcription machinery [BR:
mtr03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
11437356
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MID_MedPIWI
Med13_N
Med13_C
GNAT_like
Motif
Other DBs
NCBI-GeneID:
11437356
NCBI-ProteinID:
XP_024635286
LinkDB
All DBs
Position
3:complement(41121014..41143167)
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AA seq
1943 aa
AA seq
DB search
MWTNVFKIGSLHQISWFQFLPHEPDLNPLPDKSVKADQKDAAMLVVLSSHLQLQKEGFLS
AWTNSFVGPWDPSQGLHNPDEKIKLWLFLPGRHLTVSETAQPALTGLRAVASGLWLAPGD
SEEVAAALSQALRNCIERALLGLYYMRFGDVFLKVHQFQSEELLRRGHPAFEFVFAATEE
AILIHVIVSSKNIRMLSSGDLEKLLKHSMETTYTLPVIVSPHGIRGNLTGCSSSDLVKQS
YFSSSAKFRVSNGIIGLPYHVSQGVGCQLRGQNCFVEVSLGFPRSETDKALQSNKNIRNL
LKSPVTGHNDGKGSPDHLSDNEKTFLYPAEAVLVPVFQTSLARSSLRRFWLQNWMGPSLA
GSSSFIHCAGNVESTEDPWAEYNGSRTQNSYDSSSNSNSSSISSLSASSSDSDYKTTGPS
ELEADADSLACRQSMISSADRLGSDAKSGSKRSRTGLVQSLSTTTNIPGQDAYMSDFGSM
EVNNSAITRVGNEPTGSYWDWDDNDEENRGMELNMEALLKEFGRGFDDFFVGDELPFGEP
PGTAESQALMVYAPDCGDVNSSPVGADVMDVSDQMILPIGFSSFESFNPTSPAVMEECLN
KDQDNLNNSMSTGQTNQTQMLYTGEFDHIMKAEAMITFAPEFGAVEAPTSGLSTTLFRSP
YFPKFQKAESSNSCSNNYLYGAEPPSSPYIEGSEGKNGMVINTKTCSGKHDTSMTLHSKN
YYTFVESRKDMNEKKPVTCIANNIAKSEGIVQPPFSSVGSNVSVKSVLRKMTEDPKDAER
FTPLSAKTLLATDVTCAMLQASMCRLRHTLLSSGNNLVPVGLNRSTGVTFSNQLPTDPST
TTDNISGKYEVKKKENIPVRIAGDFDGGMLDGHLNAPVGVWRSVGTSKVVKPSNSPNMEV
GPSFSHNSFNEEGILSYAQRKPLQELLDGIALLVQQATSFVDLALDADCGDGPYGLLALQ
EQWRRGFCCGPSMVHAGCGGTLASSHSLDIAGLELVDPLSSDVHASTVISLLQSDIKTAL
KSAFTNLEGPLSVTDWCKGRSQLVDPGSMVDGVSAESSISECRDSSEPLSPSQSSVCGSS
SFKVSSLTGQDMCNSESEQQPCSRLKPTLIAVPFPSILVGYQDDWLKASANCMQHWEKAP
LEPYALQKPIAYHVVCPDIDPLTSAAADFFQQLGTVYEMCKLGTHSPLVLGNQMETESAK
LSSCGFVLLDCPQSMKIESSNASLVGSVSDYFLSLSNGWDLTSYLKSLSKALRALNLSSC
FSANPTEGSNSSCLVIYVVCPFPDPSAILQTIIESSVAIGSVIQQSDRERRSNLHSQVVK
ALSGLATVDEASASNIPVLSGFSIPKLVLQIVTVDAIFRVTSPSVSELVILKETAFTVYS
KARRISRGISSDSAQLAFSSRSQSVLPQMPSPISGMWKDCGGPRMAGHSLPRDGDIDTSL
RPGNWDNSWQPTRSGVLNCDPSRTGDIFLHDEIRYMFEPLFILAEPGSPEHGISVVGSPG
SEASKALADDSSGNHVQSTSTSGSVDSASSIDGSGSDQKTHPSLHCCYGWTEDWRWLVCI
WTDSRGELLDSNIFPFGGISSRQDTKGLQCLFVQVLQQGCLILQSCDPGLAKPRDFVIAR
IGGFYELEYLEWQKAIYSVGGSEMKRWPLQLRKSLSDGVSSTSNGSSLQQPDMSLIPERT
LPSSPSPLYSPHPKPTGFIKGNLGQSAGRKQMMGGHSTVDNSRGLLHWAQSISFVAVSMD
HTLQPVLPADSSSPGYVEGFTPVKSLGSASSAYILIPSPSMRFLPPTALQLPTCLTAESP
PLAHLLHSKGSALPLSTGFVVSKTVASMRKDYRSNLKEEWPSVLSVSLIDYYGGSSIPQE
KNVRGINKQGGRSLNWEAKDFETETHLVLESLAAELHALSWMTVSPTYLERRTALPFHCD
MVLRLRRLLHFADKELSKQSDKS
NT seq
5832 nt
NT seq
+upstream
nt +downstream
nt
atgtggaccaacgttttcaaaatcggtagtctgcatcagatatcatggtttcagtttctc
cctcacgaacctgatctgaaccctctacctgacaaaagtgtaaaagcggaccagaaggat
gctgcaatgttagtggtgctttcatcacatttgcaactgcagaaggaaggatttctcagc
gcatggaccaattcttttgttggaccgtgggatccatctcagggtttgcataatcctgat
gaaaagattaagctgtggctttttcttccggggcgtcatttaacagtttctgaaactgct
cagccagctttaactggattacgagctgtcgcgtctgggctctggctcgctcctggggat
tcagaagaagttgcagccgctctctctcaggctttaaggaattgcattgaaagagcactg
cttgggctttattacatgagatttggagatgtattcttgaaggtccatcaatttcaaagt
gaagaactgctcaggagaggacaccctgcatttgagtttgtttttgctgcaacagaggag
gcaatccttatacatgtcatagtatcctcaaagaatatccggatgctttcaagcggtgat
ctagaaaaattattgaaacattctatggagacaacatatacgcttccagtgattgtttct
cctcatggaatacgtggcaacctgactggttgttcatcaagtgatcttgtcaagcaaagt
tatttcagcagttctgccaaatttagggtgtcaaatggaattataggtctcccgtatcat
gtttcccagggtgttggttgccagctgagggggcagaattgttttgttgaagtaagcctt
ggcttccctagatctgaaactgacaaggcattgcagtcaaacaaaaatattaggaattta
ctcaaatctcctgtcacgggacacaatgatggcaagggatcaccagatcatttatcagat
aatgagaaaacatttctctatccagctgaggcagtgcttgtacccgtttttcaaacgtcg
ttagctaggtcatctttgagaagattttggctgcagaattggatgggtccatccctggct
ggttcctcatcctttattcactgtgcgggtaatgtggaatctactgaagatccttgggct
gaatacaatggatcccgaactcaaaatagttatgatagtagtagcaatagcaacagtagc
agtatcagtagcttaagtgccagctctagtgatagtgattacaagactacaggaccaagt
gaactagaggcagatgctgattctttagcgtgtagacagtctatgatatcatccgctgat
cggttgggaagtgatgccaaatcgggctccaagcgttctcgaacaggattggtacagtca
ttaagtacgactacaaatattcctgggcaagatgcgtacatgtctgattttggttccatg
gaagttaacaattcagccattacaagagtagggaatgagccaactgggtcttactgggac
tgggatgataatgatgaggagaatagaggcatggaattgaatatggaagctcttttaaaa
gagtttggtcgtggttttgatgacttcttcgttggtgatgaattgccttttggagagccc
ccaggaactgctgaatctcaggcacttatggtgtatgcccctgattgtggtgatgttaac
agcagtccagttggtgccgatgtgatggatgtttcagatcaaatgattttgcctattggg
ttttcttcctttgagagctttaatccaacttctccggcagtcatggaggaatgtcttaac
aaagatcaagataacttgaataactccatgtcaacgggtcaaactaatcaaactcaaatg
ttgtatacaggggagtttgatcatataatgaaagctgaagcaatgatcacattcgctcct
gaatttggagctgttgaggcccctactagtgggttatccacaacattattcagaagccca
tattttccaaagtttcaaaaggccgagagttcaaattcttgttcaaacaattacttgtat
ggtgcagagccaccctcttctccgtatatcgaaggatcagaggggaagaatggaatggtc
atcaatacaaaaacatgttctggaaaacatgatacaagtatgactctccactcaaaaaat
tattatacttttgtggagagtaggaaagacatgaatgagaaaaaaccagtcacttgtatt
gctaacaacattgctaaatctgaggggatagtgcaacctccattctctagcgttggttct
aatgtctctgtcaagtccgttttaaggaagatgactgaagacccaaaggacgcagagcgt
ttcactcctctatctgcaaaaactttattagcaactgatgttacctgtgctatgttgcaa
gcttccatgtgtaggttacgacacacactcttatcttctggtaacaacctcgttcctgtt
ggtttgaataggtccactggggttacattttctaatcagcttccaactgatccaagtacc
accacagacaacatatctggcaagtacgaggtgaaaaagaaagagaatataccggtcagg
attgcaggtgattttgatggaggaatgcttgatggacacctcaatgcacctgttggtgtt
tggcgctctgtaggaacttcaaaagttgtaaaaccttccaattcaccaaacatggaagtt
ggtccttccttttcccataattcattcaatgaagaaggaatcctttcttatgctcaaaga
aaaccacttcaggagcttcttgatgggattgcattgcttgtccaacaggctacttccttt
gttgatctggccttggatgcggattgtggtgatggtccttatggtttgcttgcgttgcaa
gaacagtggaggcgtgggttttgttgtgggccttcaatggtccatgctggttgtggggga
actcttgcctcttctcattccctggacattgctggcttggagttagtggatccactttct
tctgatgttcatgcatctactgtgatcagtttgttgcaatctgacataaaaacagcttta
aagtcggcattcacgaatttggaggggcccttatctgtgactgattggtgcaaaggacgc
agccaattagttgatcctggaagcatggttgatggagtttctgctgaatccagcattagt
gaatgtagggattcttcagaaccattgagtccatcacaatcatccgtttgtggatcatcc
agttttaaagtttcaagcctgactggtcaagatatgtgcaattcagaatcagagcagcag
ccgtgttcccgtctaaaacctaccctcatcgctgttccatttccttctatacttgtgggg
tatcaggatgattggctcaaggcatcggcaaactgtatgcagcattgggaaaaggctcct
ctagaaccttatgctctgcagaaacctattgcatatcacgttgtatgtcctgatatcgat
ccccttacttctgctgctgctgatttttttcaacaactaggaacagtctacgagatgtgc
aagctaggtactcattcacctctggtcttggggaatcagatggagacggagtctgcgaag
ctgtcatcttgtggttttgttttacttgattgtcctcaatcaatgaaaattgagagcagc
aatgcatctcttgttggttccgtaagtgattattttttatccttatcgaatggttgggac
ctgactagttatctcaagtctctttcgaaggcgctgagagctttaaacctgagctcttgt
ttttctgcaaaccctaccgaaggaagtaacagttcatgtttggtaatctatgtggtgtgc
ccgtttcctgatccttctgcaattttgcaaactattattgaatcatctgttgccattgga
tcggttatccaacagtcagatagagagaggagatctaacttgcatagtcaggttgtaaag
gcattgagtggtttggcaactgttgatgaagcttcagcatctaatatccctgtgctttct
gggtttagtattcctaaattggtcttgcaaatagttacagtcgatgccatttttagagtc
acaagtccatcagtgagtgagcttgtcattttaaaagagactgcctttactgtgtacagc
aaggctcgtcgcatttcacgtggcatctccagtgattccgctcaattggcattttctagt
agatctcagtctgttttgccacaaatgccctctcccatctctgggatgtggaaagactgc
ggtggtcctcggatggcaggacattctcttccaagagatggtgacattgatactagcttg
agacctggtaattgggataattcttggcaaccgacgaggtctggggttctgaactgcgat
ccaagtagaaccggggatatttttcttcatgatgaaattcgctacatgtttgaacctctt
tttattcttgctgaaccaggttctccagaacatggtatttcagttgtaggtagccccggt
tcagaagcttccaaggcattggcagatgacagtagtggtaaccatgtgcagagtacaagt
acatctgggagtgtggattctgcttcaagcattgatggatctgggtctgaccaaaagact
catccaagcttacattgttgctatggatggacagaggactggcgttggcttgtatgcatc
tggacagattcaaggggagagttgcttgactctaatattttcccctttggtggaataagc
agtaggcaggatacaaaaggtctgcagtgcctttttgttcaagttctccagcaaggttgt
ctgatacttcaatcttgtgatcccggccttgcaaagcctcgagattttgtgatagcacgc
attggaggtttctatgagcttgagtaccttgagtggcagaaagctatttattcagttggt
ggatctgagatgaagagatggcccctgcaactccgcaagtctctgtctgatggggtgtcc
tcaactagtaatggttcttctttgcaacaaccagatatgagtttgattccagaaagaact
cttccttcctcccctagtcctttgtacagccctcatcccaaaccaactggttttataaaa
ggtaatttagggcaatctgctggaagaaaacagatgatgggtggacattccacggttgac
aattcaaggggtttacttcattgggcacaaagcattagttttgttgcagtttcaatggac
catacgctacaaccagttctcccagctgattcatcatctcctggttatgtagaaggtttc
actccagtgaagtctcttggttctgcatcttctgcatatatcctaattccttctcccagc
atgcggttccttcctccaacagcacttcaactccccacatgcctcactgccgagtctcca
cctctagctcatttgcttcacagcaagggttctgctcttccgctctccacaggatttgtg
gtttcaaaaacagttgcttcaatgaggaaggactatagaagcaacctgaaagaagaatgg
ccttcagtactttcagtgagcctcattgattattatggtggttctagtatcccacaagag
aagaatgttcgtggaattaacaagcaaggtggtagatctttgaactgggaagctaaagat
tttgaaactgagacacacttggttctggagtcccttgccgcagagcttcatgccttgtca
tggatgacagtcagccccacatacctagaacgacgaacagcacttcctttccattgtgac
atggttctgagactaagacgacttcttcactttgccgacaaagagctttccaagcagtca
gacaaatcttga
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