Medicago truncatula (barrel medic): 11437744
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Entry
11437744 CDS
T01716
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
11437744
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mtr03041
]
11437744
Spliceosome [BR:
mtr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
11437744
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
Motif
Other DBs
NCBI-GeneID:
11437744
NCBI-ProteinID:
XP_003607389
UniProt:
G7JRQ3
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Position
4:37633396..37639391
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AA seq
544 aa
AA seq
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MASKRERATGDRVEEEGLDFESKRQRVDEDSSPSPPPVNIANPLSGLANNYADIDEEEDY
YQRAKGAVSDKRNGESQQNGHKYEGDDDSDEEEDSNQQLFGGRSSRQVEVRKDCPYLDTV
NRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGKKSHAYTHSLEAGHHVYINLLTEK
VFCLPDGYEIDDPSLDDIRHVLNPRFTAKDVEQLDKNKQWSRALDGSSYLPGMVGLNNIK
ETDFVNVTIQSLMRVTPLRNFFLIPENYQHCESQLVQRFGELTRKIWHARNFKGQVSPHE
FLQAVMKASKKRFRIGAQSDPVEFVSWLLNTLHADLKPPKKNMSIIYECFQGELEVVKDI
PNKNASAKETSKMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETITEVVRP
HIARMQYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKANEK
LRTKYDLIANIVHDGKPGEGSYRAFVQRKSEELWYEMQDLHVSETLPHLVALSETYMQIY
EQQQ
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaaaaagggaaagggcaactggtgatagggttgaggaggaaggacttgatttt
gaatcaaaaaggcaaagagtggacgaggactcttccccctctcctcctcccgtcaacatt
gcaaatcctctttctgggttggctaataactatgctgacattgatgaggaggaagattac
tatcaaagggctaagggtgctgttagtgacaaaaggaatggtgagtctcaacagaatggg
cataaatatgaaggggatgatgatagtgatgaagaagaagattcaaatcaacaactattt
ggtggaagaagtagtcgccaggtggaggtccggaaagactgtccttatcttgatactgtt
aatagacaggttttggattttgactttgagaagttctgttctgtgtctttgtcaaattta
aatgtgtatgcatgtttggtttgtggtaagtattaccaaggtagagggaaaaagtctcat
gcctatacgcatagtctggaagctggacaccatgtttatatcaatctcctgactgaaaag
gtcttctgtcttcccgatggctatgaaattgatgatccttcattagatgacattcggcat
gtcctgaacccaaggtttactgcaaaagatgttgaacagcttgacaaaaataagcagtgg
tctagggcacttgatggttctagttaccttccaggaatggttggactcaataatatcaag
gagactgattttgtgaatgtaacaattcaatccttaatgagagttaccccgttgaggaat
ttttttcttatccctgaaaactatcaacactgtgaatctcaacttgttcaacgatttggt
gaactcactaggaagatctggcatgcacgaaattttaaaggacaggtcagcccccatgag
tttcttcaagcagtgatgaaagctagtaaaaaacggtttcggataggtgcgcagtctgac
ccagttgagtttgtgtcatggcttcttaatacactgcatgctgatcttaaacctccaaag
aagaacatgagcataatatatgagtgttttcagggtgaacttgaggttgttaaagatatt
cctaacaaaaatgcctccgccaaggaaacgtcaaaaatgccatttttaatgttagggttg
gacttgccgccacctcctcttttcaaggatgtgatggagaaaaatataataccccaggtt
ccactctttaacatactaaagaagtttgacggtgagactatcactgaggtggtccgtcct
catatagcaaggatgcagtatcgtgttaccagattgcctaagtatatgattcttcacatg
cggcgatttactaagaacaatttttttgtggaaaagaatcctactttagtcaactttcct
gtgaagaacctggagttgaaggattacattcccttgccaacaccaaaagcaaatgagaaa
ttgcgcactaaatatgatttgattgcaaatattgttcatgatggcaaacctggtgaagga
tcctatagggcatttgtgcaaagaaaatcagaagaactatggtatgagatgcaggatttg
cacgtgtcagaaacactccctcatttggttgcgctttcagaaacttacatgcaaatatat
gagcagcagcagtga
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