KEGG   Medicago truncatula (barrel medic): 11438224
Entry
11438224          CDS       T01716                                 
Name
(RefSeq) chromatin structure-remodeling complex protein BSH
  KO
K11648  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
mtr  Medicago truncatula (barrel medic)
Pathway
mtr03082  ATP-dependent chromatin remodeling
mtr03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    11438224
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    11438224
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:mtr01009]
    11438224
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mtr03021]
    11438224
   03036 Chromosome and associated proteins [BR:mtr03036]
    11438224
Protein phosphatases and associated proteins [BR:mtr01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     11438224
Transcription machinery [BR:mtr03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     11438224
    SWI/SNF complex
     11438224
Chromosome and associated proteins [BR:mtr03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    11438224
   PBAF complex
    11438224
   SWI/SNF complex
    11438224
SSDB
Motif
Pfam: SNF5
Other DBs
NCBI-GeneID: 11438224
NCBI-ProteinID: XP_003609906
UniProt: G7JR36
LinkDB
Position
4:complement(59434627..59437954)
AA seq 240 aa
MKTPVSAFYRNPVKFRMPTSENLVPIRLDIEIDGHRYKDAFTWNPSDPDSEVVVFAKRTV
RDLKLPPPFVTQIAQSIQSQLAEFRSYDGQDMYAGEKIVPIKLDLRVNHTLVKDQFLWDL
NNFDSDPEEFARTFCRDMGIEDPEVGPAIAFAIREQLYEIVVQSVVSARESRLSKKGRRG
ADFFPVSKGGAVAVDLVKLFGIKSSVVRKRKEWDVYEPIVDLLSNEEVDILEAKEERNFR
NT seq 723 nt   +upstreamnt  +downstreamnt
atgaaaacccctgtttccgctttctacagaaaccctgtcaagttcaggatgccaacttcg
gaaaatctcgtacccattcgactcgacattgaaatcgacggtcatagatacaaggatgcc
ttcacttggaacccttctgatcctgattctgaggttgtggtgtttgctaaaagaaccgtg
agagacttgaagctacctccaccttttgttactcaaattgctcaatccattcaatctcag
cttgctgaatttcgatcctatgacggtcaagatatgtatgctggagaaaagattgttccc
atcaagcttgatcttcgtgtaaatcatacgcttgtaaaggaccaatttttatgggacttg
aacaactttgatagtgatcctgaagagtttgcaagaaccttctgcagagacatgggcatt
gaggatcctgaggttggaccagctattgcctttgccatcagagaacagctttacgagatt
gtagttcagagtgtggtttctgcaagagaaagcagattaagcaagaagggtcgtcgaggg
gctgacttctttccagtcagtaaaggaggcgctgtagcagtggacttggtcaagctattt
ggtattaaatctagtgttgtccggaaaagaaaggagtgggatgtatatgaacccattgtg
gatcttctatccaacgaggaagttgatatccttgaagcaaaggaagagagaaatttcagg
tga

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