Medicago truncatula (barrel medic): 11438240
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Entry
11438240 CDS
T01716
Name
(RefSeq) WD repeat-containing protein 75
KO
K14552
NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
11438240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mtr03009
]
11438240
Ribosome biogenesis [BR:
mtr03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
11438240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR75_1st
Beta-prop_WDR75_2nd
WD40_WDHD1_1st
WD40_Prp19
WD40
Beta-prop_EML_2
WDR55
Beta-prop_CAF1B_HIR1
WD40_CDC20-Fz
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
Beta-prop_Nup120_160
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
11438240
NCBI-ProteinID:
XP_003610089
UniProt:
G7JUE1
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All DBs
Position
4:61302012..61309783
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AA seq
788 aa
AA seq
DB search
MKGGQSYVSCSPSFSNSGDRLLVGSGTSVAIFSTTTALQVSSLDGHTDTVTSVIVVPGSN
IVTYCWTSSLDGTIRHWDFSLLKCIKIIDLKLPIFSMVIPSLLSPEEEISEKKHFAYVCM
QTGNEKDNRPKLCSAQIRKCNLTDFHKLSTITLKETKKPHPLIVSPCGKFLGIKEKRTLH
IWKVPKVDSNSAVSKKISLHHTKTFSVLAFHPTERIVAAGDVTGRILIFRGFGAKNFQEN
DVLLNRTSMTDEECKPGVRQNDDAESCSTWHWHSDAVNLLSFSSDGVYLYSGGKEGVLVL
WQLDTGKKKFLPRIGSPLRYFVDSLDPSFASISCADNQIHILKISSVEIMRSISGIKPPL
SSQETCESISSQAAFDRSSGLVAVQTDNYGIQFYSLFANRGLYEVQVCERNYQPVDEVTV
VVTMVELSTDGSMMGTVEVKLPEEGIGGLICLKFWDLDSDTKRFSMSTLVYEPHRDAHIS
AITFHPTCRMAVSTSYGGDFKIWVCREETQQKDQTHRNFSWMCHAVGSYKNKAMRAAAFS
ADGSVLAVAADTVITLWDHDKNELIAVVGETPSPIGRLIFVGNSEYLLSVSYGSTPQLSV
WSMSKLAASWSYRIQIEAVSCALDLSYFAIIALIPKSKERLFKGDGIILVFNATDPIPVA
SWSVTKAKGGSIAFIKGKTSQTLLAYLNGDREYVLFDPYDKEAHELNMTMEDDLVGLEEN
GQFGYTSIYPELPAFELKRNKTSSVFSGVSNRPWETIFSGSSHMLPPLTKLCSEFMESLM
EKRTSMVE
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgaagggaggacaaagctatgtctcgtgttctccatctttctccaactccggcgaccgt
cttctagtcggctccggcacctccgtcgctatcttctccaccaccaccgccttacaagtt
tcctcccttgacggtcacaccgatactgtcacctccgtcatcgtcgtccccggttcaaac
attgttacctactgttggacctcttccctcgacggcaccattcgccattgggatttctcc
cttctcaaatgcatcaaaataattgatctaaaacttcccattttctccatggtgatacct
tcgttattgtcaccggaagaagaaatcagtgaaaagaagcattttgcgtatgtgtgtatg
caaactggaaatgagaaagataatagacctaaactttgttctgcacagattagaaagtgt
aatttgacagattttcacaagctttccacaattactttgaaagagactaaaaagcctcac
cctttgatcgttagtccatgtgggaaatttctgggcataaaggaaaaacgcacgcttcat
atatggaaagttcctaaagtggactctaattctgctgtctcaaagaagatttccctgcat
catacaaaaaccttttccgttcttgcattccatccaactgagaggattgtggctgcgggc
gatgtaactggaagaattttaatttttagaggatttggtgctaagaactttcaggaaaat
gatgtgctgttgaacagaacatcaatgactgatgaggaatgtaagcctggggtaaggcaa
aatgatgatgccgaatcatgttccacatggcattggcactctgatgcagtgaatctttta
tccttttcttcagatggagtctatttgtattcaggtgggaaggaaggagttctcgtgctt
tggcagctagacaccggaaagaagaaatttttaccaagaattggatctccgcttcggtat
tttgtagattctctagatccttcatttgcctcgatatcttgtgcagataaccaaattcat
atattaaagatctcttctgtggagataatgaggtctatttcagggatcaagcctcctttg
tcttctcaagaaacatgtgaaagtatttctagccaagctgcctttgaccgctcttctggt
ttagtggctgtccaaacagataattatggcatccaattctacagcttgtttgctaatcgt
ggactttatgaggtgcaagtatgtgaaagaaattatcaaccagttgacgaggtcacggta
gtagtgaccatggtggagttgtctactgacggctctatgatgggtaccgtagaagtcaag
cttcctgaagaaggaataggaggtcttatttgtttgaaattctgggatttggattcagat
accaaaagattttcaatgtccacccttgtttatgaacctcacagggatgctcatatttcc
gctattacgtttcatccgacctgtcgtatggctgtcagcacatcttatggtggagatttc
aagatatgggtttgcagggaagaaactcagcagaaagaccagacgcatcggaattttagt
tggatgtgccatgctgttgggtcatataaaaataaagcaatgagagctgctgctttttca
gcagatggttctgtgcttgcggttgcagctgacactgttattacattgtgggaccatgac
aagaatgagctcattgctgttgtaggagagactccatcgccaattgggaggctcatcttt
gttggaaattcagagtatcttctttccgtatcttatggttctacaccacagctgtctgtt
tggagtatgtcaaagttagctgcatcttggtcatataggattcaaatagaagctgtttca
tgtgcattagatttatcatattttgctatcattgctctcattcccaaatcaaaggaacgt
ctatttaaaggtgatggaataatcttagtattcaacgcaacagatcctattccagtggct
tcctggtctgtaacgaaggccaagggagggagcattgcttttattaaaggaaaaacatca
caaacactgcttgcatatttaaatggagatcgtgaatatgttctctttgatccatatgac
aaggaagcacatgaacttaatatgactatggaggatgatcttgttgggcttgaagaaaat
ggacaatttggatatacatcaatttatccagagttacctgcgtttgaattaaaaaggaac
aagacatcatcagttttctctggtgtatcaaataggccttgggaaaccatatttagtggg
tcatcacatatgttgccacccctcacgaaattgtgttctgaatttatggagtctctgatg
gagaaaaggacatcgatggtagaatga
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