KEGG   Medicago truncatula (barrel medic): 11438240
Entry
11438240          CDS       T01716                                 
Name
(RefSeq) WD repeat-containing protein 75
  KO
K14552  NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
Organism
mtr  Medicago truncatula (barrel medic)
Pathway
mtr03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    11438240
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:mtr03009]
    11438240
Ribosome biogenesis [BR:mtr03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    11438240
SSDB
Motif
Pfam: Beta-prop_WDR75_1st Beta-prop_WDR75_2nd WD40_WDHD1_1st WD40_Prp19 WD40 Beta-prop_EML_2 WDR55 Beta-prop_CAF1B_HIR1 WD40_CDC20-Fz Beta-prop_EML Beta-prop_IFT140_1st Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_TEP1_2nd WD40_MABP1-WDR62_1st Beta-prop_Nup120_160 WDR90_beta-prop_4th
Other DBs
NCBI-GeneID: 11438240
NCBI-ProteinID: XP_003610089
UniProt: G7JUE1
LinkDB
Position
4:61302012..61309783
AA seq 788 aa
MKGGQSYVSCSPSFSNSGDRLLVGSGTSVAIFSTTTALQVSSLDGHTDTVTSVIVVPGSN
IVTYCWTSSLDGTIRHWDFSLLKCIKIIDLKLPIFSMVIPSLLSPEEEISEKKHFAYVCM
QTGNEKDNRPKLCSAQIRKCNLTDFHKLSTITLKETKKPHPLIVSPCGKFLGIKEKRTLH
IWKVPKVDSNSAVSKKISLHHTKTFSVLAFHPTERIVAAGDVTGRILIFRGFGAKNFQEN
DVLLNRTSMTDEECKPGVRQNDDAESCSTWHWHSDAVNLLSFSSDGVYLYSGGKEGVLVL
WQLDTGKKKFLPRIGSPLRYFVDSLDPSFASISCADNQIHILKISSVEIMRSISGIKPPL
SSQETCESISSQAAFDRSSGLVAVQTDNYGIQFYSLFANRGLYEVQVCERNYQPVDEVTV
VVTMVELSTDGSMMGTVEVKLPEEGIGGLICLKFWDLDSDTKRFSMSTLVYEPHRDAHIS
AITFHPTCRMAVSTSYGGDFKIWVCREETQQKDQTHRNFSWMCHAVGSYKNKAMRAAAFS
ADGSVLAVAADTVITLWDHDKNELIAVVGETPSPIGRLIFVGNSEYLLSVSYGSTPQLSV
WSMSKLAASWSYRIQIEAVSCALDLSYFAIIALIPKSKERLFKGDGIILVFNATDPIPVA
SWSVTKAKGGSIAFIKGKTSQTLLAYLNGDREYVLFDPYDKEAHELNMTMEDDLVGLEEN
GQFGYTSIYPELPAFELKRNKTSSVFSGVSNRPWETIFSGSSHMLPPLTKLCSEFMESLM
EKRTSMVE
NT seq 2367 nt   +upstreamnt  +downstreamnt
atgaagggaggacaaagctatgtctcgtgttctccatctttctccaactccggcgaccgt
cttctagtcggctccggcacctccgtcgctatcttctccaccaccaccgccttacaagtt
tcctcccttgacggtcacaccgatactgtcacctccgtcatcgtcgtccccggttcaaac
attgttacctactgttggacctcttccctcgacggcaccattcgccattgggatttctcc
cttctcaaatgcatcaaaataattgatctaaaacttcccattttctccatggtgatacct
tcgttattgtcaccggaagaagaaatcagtgaaaagaagcattttgcgtatgtgtgtatg
caaactggaaatgagaaagataatagacctaaactttgttctgcacagattagaaagtgt
aatttgacagattttcacaagctttccacaattactttgaaagagactaaaaagcctcac
cctttgatcgttagtccatgtgggaaatttctgggcataaaggaaaaacgcacgcttcat
atatggaaagttcctaaagtggactctaattctgctgtctcaaagaagatttccctgcat
catacaaaaaccttttccgttcttgcattccatccaactgagaggattgtggctgcgggc
gatgtaactggaagaattttaatttttagaggatttggtgctaagaactttcaggaaaat
gatgtgctgttgaacagaacatcaatgactgatgaggaatgtaagcctggggtaaggcaa
aatgatgatgccgaatcatgttccacatggcattggcactctgatgcagtgaatctttta
tccttttcttcagatggagtctatttgtattcaggtgggaaggaaggagttctcgtgctt
tggcagctagacaccggaaagaagaaatttttaccaagaattggatctccgcttcggtat
tttgtagattctctagatccttcatttgcctcgatatcttgtgcagataaccaaattcat
atattaaagatctcttctgtggagataatgaggtctatttcagggatcaagcctcctttg
tcttctcaagaaacatgtgaaagtatttctagccaagctgcctttgaccgctcttctggt
ttagtggctgtccaaacagataattatggcatccaattctacagcttgtttgctaatcgt
ggactttatgaggtgcaagtatgtgaaagaaattatcaaccagttgacgaggtcacggta
gtagtgaccatggtggagttgtctactgacggctctatgatgggtaccgtagaagtcaag
cttcctgaagaaggaataggaggtcttatttgtttgaaattctgggatttggattcagat
accaaaagattttcaatgtccacccttgtttatgaacctcacagggatgctcatatttcc
gctattacgtttcatccgacctgtcgtatggctgtcagcacatcttatggtggagatttc
aagatatgggtttgcagggaagaaactcagcagaaagaccagacgcatcggaattttagt
tggatgtgccatgctgttgggtcatataaaaataaagcaatgagagctgctgctttttca
gcagatggttctgtgcttgcggttgcagctgacactgttattacattgtgggaccatgac
aagaatgagctcattgctgttgtaggagagactccatcgccaattgggaggctcatcttt
gttggaaattcagagtatcttctttccgtatcttatggttctacaccacagctgtctgtt
tggagtatgtcaaagttagctgcatcttggtcatataggattcaaatagaagctgtttca
tgtgcattagatttatcatattttgctatcattgctctcattcccaaatcaaaggaacgt
ctatttaaaggtgatggaataatcttagtattcaacgcaacagatcctattccagtggct
tcctggtctgtaacgaaggccaagggagggagcattgcttttattaaaggaaaaacatca
caaacactgcttgcatatttaaatggagatcgtgaatatgttctctttgatccatatgac
aaggaagcacatgaacttaatatgactatggaggatgatcttgttgggcttgaagaaaat
ggacaatttggatatacatcaatttatccagagttacctgcgtttgaattaaaaaggaac
aagacatcatcagttttctctggtgtatcaaataggccttgggaaaccatatttagtggg
tcatcacatatgttgccacccctcacgaaattgtgttctgaatttatggagtctctgatg
gagaaaaggacatcgatggtagaatga

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