Medicago truncatula (barrel medic): 11438321
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Entry
11438321 CDS
T01716
Name
(RefSeq) uncharacterized protein LOC11438321
KO
K14315
nucleoporin NDC1
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
11438321
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtr03019
]
11438321
Messenger RNA biogenesis [BR:
mtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
11438321
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
11438321
NCBI-ProteinID:
XP_003593880
UniProt:
G7IP46
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All DBs
Position
2:6050157..6055265
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AA seq
494 aa
AA seq
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MSPTPSKPEVLLTNKFLSFLIWQSIPSSFIFFLSFTLLPITPFWSFPLFLLFNFLFSFSL
SFISSPSSHPIFNPLNFKLSLTFLLFVAAAAVSASVAVVSLFGFNDLGKVGFRGFLAGAI
YGFHYVFKRRWVLEFPIIQRPPFYNFKMGIPLAAKRAFKLSTVAFIFSAILLEIIPHPFK
CSIATKKFVAEQIVFFVASFAIFFSWELTHNLHTVLHTKRSIFAPPKGSAAAETNPSEHL
LSALEESNPTSLLRYHAYLDLCMVSENNVDTWRRAAFFEETGETYKRVIAVCLRPLEQLA
SRLGEDLGNSTDKPTNLSNQLASPTDVKHVEELYNFQLYAWCSRIVASLTACSRKEDKFG
AAQLSGSNAAVVSTLISCLLAVENFMGKKTNLQSPNQLLGSAGIKWATANSGRLDIAAAS
VKRKNGPVNSKAYAIADVLKTSIYQIVSAFHDEMLSGTKSSLLEKDWITSEKPLFGTREM
LIQKLRLFLDFRAT
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgtctccaacaccatcaaaaccagaagttctcttaaccaacaaattccttagctttttg
atatggcaatcaataccctcatctttcatcttctttctctccttcacccttctccccata
acccctttttggtcttttccccttttccttcttttcaacttcctcttctccttttctctc
tccttcatctcttcaccttcctcacaccccattttcaatcctctcaacttcaagctctca
cttacattcctcctcttcgtagccgctgccgcggtctccgcttccgttgcggttgtttcg
ctttttgggtttaacgatttgggaaaagttgggttcaggggttttcttgctggtgccatt
tatgggtttcattatgttttcaaacgacgttgggttttggagtttcccattattcagcgt
cctcctttctacaattttaagatggggattcctttggctgctaaacgtgcttttaagctt
tccactgttgctttcattttttctgctattttattggagattattccacacccttttaag
tgcagcattgcaacgaagaaatttgttgctgagcagattgtattttttgttgctagtttc
gctatcttcttcagttgggaattgactcacaatttacatacggttttacataccaagaga
tccatatttgctcccccaaaaggatcagcagctgcggaaacaaatccaagtgagcacctc
ctttcagctctggaggagagtaatccaacatctcttcttcgatatcatgcttatcttgat
ctctgtatggtttccgagaacaatgttgatacttggcggcgtgcggcatttttcgaagaa
acgggtgagacttacaaaagggtaattgctgtgtgcttgaggcctcttgaacaacttgcc
tcgagattaggtgaggacttggggaattctaccgacaaacctacaaatctatctaatcag
ttagcctccccaacagatgtgaagcacgttgaagaactgtataacttccagctatatgct
tggtgttcaaggattgttgcctcactaactgcctgttctcgcaaagaagataagtttggg
gctgctcagctttctgggagtaacgctgctgtggtttcgaccctgatatcatgccttctt
gctgtcgagaatttcatgggaaagaaaacaaacctgcaatcaccaaatcagctgttggga
tctgctggtatcaaatgggcaacggcgaatagtggaagattagatattgcagctgcttct
gttaaaagaaaaaacgggccagtaaattcaaaagcttatgctattgccgacgttctcaag
acatcgatctaccaaatagtatctgcattccatgatgagatgttgtctggtactaaatca
agtcttctggagaaggactggatcacaagcgagaaaccacttttcggtactcgtgagatg
cttatacaaaaattacgtcttttccttgattttcgggctacctag
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