Medicago truncatula (barrel medic): 11438359
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Entry
11438359 CDS
T01716
Name
(RefSeq) amino acid transporter AVT1A
KO
K15015
solute carrier family 32 (vesicular inhibitory amino acid transporter)
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
11438359
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mtr02000
]
11438359
Transporters [BR:
mtr02000
]
Solute carrier family (SLC)
SLC32: Vesicular inhibitory amino acid transporter
11438359
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Motif
Pfam:
Aa_trans
TPR_3
Motif
Other DBs
NCBI-GeneID:
11438359
NCBI-ProteinID:
XP_039689699
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Position
4:21700179..21707037
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AA seq
520 aa
AA seq
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MGSSNKEKERNIEFMFNDDDVEEQYEKIESESSSDNDDDDDHSVQLQSFTSQQWPQSYKE
TTDSYTIATAPNFVSILRGPSSIYSSFSNRSKSDLDIDGKTPFLSGLEGTTQSTWWEKRS
TQNLVGEMPLGYGCSYTQTVFNGINVMAGVGLLSTPYTVKQAGWMGLVLMLIFASVCCYT
ATLMRHCFESREGLTSYPDIGEAAFGRYGRIFVSIILYTELYSYCVEFITLEGDNLTGLF
PGTSLDIGGLHLDSMHLFGVLTALVILPTVWLKDLRVISYLSVGGIAATILIIISVFSVG
TTVGFHHTGRVVNWSGIPFAIGVYGFCFAGHSVFPNIYQSMADKKQYTKALITCFVLCIL
IYGSVAVMGFLSFGDDTLSQITLNMPAGAFASKVALWTTVINPLTKYALLMNPLARSLEE
LLPERVSSTYWCFILLRTTLVASTVCAAFLIPFFGLVMALIGSLFSMLVSVVMPSLCFLK
IVGKKATRSQVIVSVIIAAAGIVCGLLGTYSSLMDIVNSY
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgggtagcagcaataaggagaaggagagaaacattgagtttatgtttaacgatgatgat
gtagaggaacaatatgaaaagatagagagcgagagtagtagtgataatgatgatgatgat
gatcattcagttcagcttcagtctttcacttctcagcaatggcctcaaagctacaaagag
actacagattcttacacaattgctacagcaccaaattttgtgtcaattctacgagggcca
agttctatttattcaagttttagcaatcgttcaaagagtgacttagacatagatggaaag
actccttttctatcaggtcttgaaggtactactcaatccacatggtgggagaaacgttcg
acgcaaaatcttgttggagaaatgcctcttggttatggttgcagctacactcaaacagtt
ttcaatgggattaatgtgatggctggagtgggccttctgtctacaccttatacagtgaaa
caagctggttggatgggcttggtcctgatgcttatttttgcatctgtttgttgttataca
gccacccttatgagacactgctttgaaagcagagaaggactcactagctatccagatata
ggagaagctgcatttggtagatatggccgtatttttgtatctatcattttgtacactgaa
ttatattcatattgtgtggaattcatcaccttggaaggagataacctcactggtctgttt
cctggaacgtccttagatataggcggtctccatttagattccatgcacttgtttggagtt
ctgactgcattagttattctacccactgtttggttgaaggatctccgagtaatctcgtat
ctatcagttggagggattgcagcaacaatattgattattatatctgtgttctctgtcggg
acgactgttggattccatcatactggtcgagtggtgaattggagcggcattccatttgct
attggtgtttatgggttttgctttgcaggacattcagtctttccaaatatataccagtct
atggctgacaaaaaacagtataccaaagcattgataacatgttttgttttgtgtattttg
atatatggaagcgttgcggtcatgggatttctctcctttggcgatgacactctgtctcag
ataacattgaatatgccagcaggtgcatttgcttccaaagttgcattgtggacaacagta
attaacccattgactaaatatgctttgttgatgaatccactggcgaggagtctagaggag
ttgctgccagagagagtttcaagtacttattggtgctttattcttcttagaacaacactt
gttgcatctacagtttgtgctgcttttctgattcctttttttggacttgtgatggctttg
atcggttcactcttcagtatgcttgtgtcggtggtaatgcccagtttatgctttttaaaa
attgtcgggaagaaggctacaaggtcacaggttatcgtgagcgttataattgctgctgcc
ggaatcgtttgtggactacttggaacatattcctctctgatggatattgtcaacagttac
taa
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