Medicago truncatula (barrel medic): 11439344
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Entry
11439344 CDS
T01716
Name
(RefSeq) uncharacterized protein LOC11439344 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtr03019
]
11439344
Messenger RNA biogenesis [BR:
mtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
11439344
Surveillance factors
Other surveillance factors
11439344
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
Tis11B_N
Motif
Other DBs
NCBI-GeneID:
11439344
NCBI-ProteinID:
XP_003622117
UniProt:
G7L261
LinkDB
All DBs
Position
7:9772908..9783119
Genome browser
AA seq
1646 aa
AA seq
DB search
MAMSDGTKMNLPDDLFSSKLTDSSHSSLKDEASGGHGEKGIAALLDDSKDQVLSDSSIPL
SPQWLYSKPVDAKPTGNPVGVNSNDPVLKDNWRLEGSLDKKDWRKTTPDVEISRRWREEE
RETSLLGRRDRRKEDRRLENTSTSENRSLPADRWNDSRGSGNDSRRENKWSSRWGPEEKE
KDARNEKRNDVEKEDGHAEKQSTGASNRAVSDRDTDSRDKWRPRHRLESQAAGVATYRAA
PGFGLEKGRTEGSNVRFSPGRGRANFNGNLQIGRPPIGSSVGSVLMDTNKTILGKPSLGA
DSYCYPRGKLLDIYRKQKGDPTFVSMPSEVEQTSPITQIDLVEPLAFVAPADEEEAVLKD
IWKGKITSSEVSGYSRGKDGGSIGDISGSGALSEGKQLSISSGGKFISGNEILNESDQLF
IESASTAGSLTNTAEEVANFQEGKQKHVPTMGMHWKDEIIPRNKAAESEAFAYHQGQLSS
FEEHANQDGIKSLASEISKSLPDDSRSLFDFSSLRQSPSINQHNEKKYPSENVAVPEELS
LCYLDPQGMIQGPFLGIDIILWFEQGFFGIDLLVRSSDAPEGSPFQELGDIMPHLRVNTG
LGSDSNMVNQSEPSDAIGRNLKVDVNSFDYNGSSFADDQPWSSSRPGSTSSVGIPSQTPN
RSYHPEIKFSDEQYFNNIGAQDEGTTMSKLAGSNNGNPLMRPVEANAAYSHHTGKPVANE
AIGSDTHNSEADKLHPFGLLMSELRDGSQLRRAQSSNSSLRLGDQSHFTDPLIDRDAPFT
DQSSMGGMVNQSSFRDTWTDEYGINRHFNPNQRVGSLEDQFLSRIGPNFNNFDVADHLML
QKLQKERLQQQQAERLQQQQAERLQQQQAERLQQQQAERLQQQQAERLQQQTNISSHFPA
YLNGSDLDRFPGFSPSQSNKSGIQQMMQNPGTDFERLFELQAQQRQLEIQQQDMHHQQLL
QQLKLQPQQQSQVQQLLLEQLMHQQMSDPNFGQSKHDPSRDNLLDQVQLRRYLHDLQQNP
HSLGHLDPSMEQFIQANIGLNAAQGRQADLSELLLQARHGNILPSDQQLRFQQDQLQAQQ
LSMALRQQLGLDGERHFGRSRPINETGQLVRNPSNHQLGHSAGFNVSEIHKQQQMLAAQE
EQLNFLGRNHLEQNQRGFYDPSSMMFERSSPVNVQGRELLERRRFMHPSDQLGPLSSHHN
LQSSDDLFGHHSLSGNNGHVDNNWIDPRLQLQHLEAMRQRRELGDNITSADLNIAASAAG
HEESSGRGFVDLLHQKLGLQSAQSSTVDKWNHPLSSRSHDNKSWHVPEASSILHPFELPP
DQQAHINDPFLERAQSANSSVLMHDHLTNIHMNEHYKNLGNTERVPLRSRSGSLLEEQSL
LSTNKDTLHPNYRIPFQIGKSSMEKDLLELDTNKGHRHEFMGTMGKFVPGMSDLSEQVEN
PMPSMEMPSITHSRHSSLSSAGGGDGGSFGREMGLNSSRGDEVSSDRIPPSTKGFDNAFH
KRPHVSRVLSSPDVQSDQPSVPHVSQNQLLNLASNEGRRESSGNLSAASMADAQAAGKKE
ARFRSSSFSEGAMSEASFIDMLKKPVLPEADVHQTSGAAAEPADGGQAGRGGKKKGKKGK
QIDPSLLGFKVSSNRIMMGEIQRPDD
NT seq
4941 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgagcgacggcaccaaaatgaatctccccgacgatctcttctcatccaaactc
accgattcgtcgcactcttctctcaaagatgaagcatctggaggacatggagagaaaggc
attgcggcactactcgatgattcgaaagatcaagtgttatctgacagcagcataccgtta
tccccacagtggctttattccaaacctgttgatgcaaagccaactggcaatccagtaggg
gtgaattccaatgatcctgtactgaaggataattggcgtttggaggggtctttggacaag
aaagattggagaaagactactcccgatgttgagatcagtcgaaggtggcgtgaagaggag
agagaaacaagtttgctcgggagaagggatcgtagaaaagaagatcgtcgtttggagaac
acctcaacctcggagaataggtctttgcctgctgatcgttggaatgatagccgtggttct
ggcaatgactctcggagagagaataagtggtcatcaagatggggtcctgaagaaaaagaa
aaggatgctcgaaatgagaaaaggaatgatgtggagaaggaagatggccatgcagaaaaa
caatctactggtgctagcaaccgtgcagtttctgatcgtgacactgattcccgtgataaa
tggaggccacgacatcgcttggaatctcaagcagctggtgtggccacataccgtgctgca
cctggatttgggctggagaaaggacgtacagagggctccaatgtgcgattttcaccagga
agaggaagggcaaatttcaatggaaaccttcaaattggaaggcctcccataggctctagt
gttggatctgttcttatggatactaataaaactatattggggaagcctagccttggtgct
gattcatattgctacccaaggggtaagcttcttgacatatatcgtaagcaaaagggtgat
ccaacttttgtgagtatgccttctgaggtggaacaaacgtcgccgataactcaaattgat
ttggtagaaccattagcatttgttgctcctgcagatgaggaggaggctgtccttaaagat
atatggaagggaaaaattactagcagtgaagtctcaggctactctagaggaaaggatgga
gggtcaattggtgatatatctggttctggtgctttgagtgaaggaaaacaactttcaatc
agtagtggtggaaagtttatatcaggaaacgaaatcttaaatgaatccgatcaacttttt
attgaatcagcatcaactgctggttcattgacaaatacagccgaggaagtcgcaaatttt
caagaaggcaagcagaaacatgtgccaactatgggcatgcattggaaagatgagattatt
cccagaaacaaggctgctgaatcagaggcttttgcttaccatcagggacaactttcttct
tttgaggaacatgctaatcaggatgggatcaagtcattggcttcagaaattagtaaaagc
cttcctgatgattcccgctctctctttgatttttcatctttgcggcaaagtccaagcatt
aatcaacataatgagaagaaatatccatctgaaaatgttgctgttcccgaggagttgagt
ttatgctatctggatcctcaagggatgattcaaggaccctttcttgggattgacatcatt
ttgtggtttgaacaaggtttttttgggatcgacttgcttgttcgctcttcagatgcccca
gaaggatctccttttcaagaacttggtgacattatgcctcatctgagagttaacacaggg
ttaggttctgatagtaacatggttaatcagtcagaaccatctgatgccattggaagaaac
ctaaaagttgatgtaaattcatttgactataatgggtcttcttttgctgacgatcaacca
tggtcttcatcccgacccggttctacatccagtgttggtattccttcccaaacacctaat
cgaagttatcaccctgaaatcaagttctctgatgagcagtacttcaataatattggtgca
caagatgaggggaccacaatgtcaaaattggctggaagcaacaacggcaaccctttgatg
aggcctgtggaagccaatgctgcatattcccatcatacaggaaaacctgttgcaaatgaa
gctattgggagtgacactcataatagtgaggcagataagttacatccctttggtttattg
atgtctgaacttagagatggatctcagttaaggcgtgcacaatcctccaacagttcttta
agattgggtgaccagagtcattttactgatccactaattgatagagatgctccttttact
gatcaaagctctatgggtggcatggttaatcagtcttctttcagggatacctggaccgac
gaatatgggataaataggcattttaatcctaatcagcgtgtaggttcactagaagatcag
tttttgtctcggattggaccaaactttaacaattttgatgtggcagaccatcttatgctg
cagaagctgcagaaggaacgccttcagcagcagcaggcggagcgacttcaacagcagcag
gctgaacgtcttcagcaacagcaggctgaacgacttcagcaacagcaggctgaacgtctt
cagcaacagcaggctgaacgacttcagcagcagactaatatatctagtcatttccctgca
tatcttaatggatcggatttagatagatttcctggtttctctccatctcaaagcaataaa
tctggcatccagcaaatgatgcagaatcctgggacagatttcgaacgtcttttcgaactg
caggctcaacaacgccagcttgagattcaacagcaagatatgcaccatcaacaactactt
caacagttgaaactacagccccaacaacagtctcaagttcagcagttgcttcttgagcag
ttaatgcatcagcagatgtctgatccgaattttggacagtcaaaacacgatccttctagg
gataacttgctagatcaggtacaattgcggagatatctgcatgacttgcagcagaatcca
cattctttagggcaccttgatccatcaatggagcagtttatccaagcaaatataggtctc
aatgctgcgcaaggaaggcaagctgatttgtcagagctcttgttgcaagcaaggcatgga
aatatattgccctcagaccaacaacttcgttttcagcaagaccagttgcaagctcagcag
ttatctatggctcttagacagcagttagggctggatggagaaaggcattttggtaggtca
cgaccaattaatgaaactggacagttagtaagaaatccatcaaaccaccaactgggtcat
tctgctggatttaatgtttcagaaatccacaaacaacagcagatgcttgcggctcaagag
gagcaattaaatttcctgggaaggaatcatcttgagcagaaccaaagagggttctatgat
cctagttctatgatgttcgagaggtcttcgcctgtcaatgtgcaaggaagggaattatta
gaacgccgtcgcttcatgcacccatcagatcaactgggtcctttgtcttctcatcacaac
ctacaatcatctgatgatctatttggtcaccattccctctctgggaacaatggccatgtg
gataataactggattgatccacggttgcagcttcaacatcttgaagctatgaggcagaga
agagagttgggggataatatcacatcagcagatctgaacatagctgcgtccgctgcaggc
catgaagagagttcaggacgaggttttgtggaccttcttcatcagaaactgggtcttcaa
tctgcacaatcatcaactgttgataagtggaatcatcccctttcgtcaagaagtcatgat
aataaatcttggcatgttccagaggctagctcgatacttcatccttttgagcttcctcca
gatcagcaagcccatataaatgatccatttctggagagggctcagagtgcaaattccagt
gtgctaatgcatgatcatttaaccaacatacatatgaacgagcattacaaaaatctaggg
aatactgaaagagtgcctcttcggtcgagatctggttcattacttgaagaacaatcactg
ttatctacgaataaggatactttgcatcccaattacagaattccttttcagattggtaaa
tcatctatggagaaagacttgcttgagttggataccaataagggacacagacatgaattt
atgggcacaatgggaaagtttgttcctgggatgtcagacttgtcagaacaagtggaaaac
cccatgccatccatggaaatgccttctattactcatagtagacatagctcgctaagcagt
gcaggtggtggtgatggcggctcttttggtcgtgagatgggtttgaatagctcacgtgga
gacgaagtttctagtgacaggattcctccttcaacaaaagggtttgataatgctttccat
aagcgccctcacgtgtctcgggttttgtcttccccagacgtccagtcagaccaaccatct
gtacctcatgtcagtcagaaccaattattgaaccttgcatctaacgaagggaggcgagaa
tcctctggaaatctgtcagctgccagcatggctgatgctcaagctgctgggaagaaagag
gctcggtttagatcttcatccttcagtgaaggtgccatgtcagaagcatcatttatagat
atgcttaaaaagcccgttcttcctgaggcagatgtgcatcaaaccagtggagctgcggca
gagccagctgatggtggtcaagcaggacgaggtggtaagaagaagggaaagaaagggaag
cagatagatccttctcttcttggtttcaaggtctccagtaaccgaatcatgatgggtgag
attcaacgccctgatgattaa
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integrated database retrieval system
