Medicago truncatula (barrel medic): 11439957
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Entry
11439957 CDS
T01716
Name
(RefSeq) cell division cycle 20.2, cofactor of APC complex
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
11439957
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mtr04121
]
11439957
03036 Chromosome and associated proteins [BR:
mtr03036
]
11439957
Ubiquitin system [BR:
mtr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
11439957
Chromosome and associated proteins [BR:
mtr03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
11439957
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
ANAPC4_WD40
WDR55
Beta-prop_WDR19_1st
EIF3I
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
eIF2A
Beta-prop_WDR75_1st
Beta-prop_WDR35_TULP_N
Ge1_WD40
Beta-prop_SCAP
Beta-prop_RIG_1st
RMC1_N
Beta-prop_VPS8
Beta-prop_IFT80_2nd
CFAP43_N
YajC
Motif
Other DBs
NCBI-GeneID:
11439957
NCBI-ProteinID:
XP_003610876
UniProt:
G7K6J6
LinkDB
All DBs
Position
5:1644700..1647328
Genome browser
AA seq
454 aa
AA seq
DB search
MASGSLSSPAIKTQSRFPLQEHLQRKSSKENLDRFIPNRSAMDFDYAHYMVTEGAKGKEN
PEVCSPSREAYRKLLAESLNMNRTRILAFKNKPPTPVDSIPHELTSSSLQEDKTIKPRRI
IPQTSERTLDAPDLVDDYYLNLLDWGSANVLAIALGNTVYLWDASNGSTSELVTVEEEDG
PITSVSWAPDGRHIGIGLNNSEVQLWDTASDKQLRTLKGGHRQRVGSLAWNNHILTTGGM
DGKIINNDVRIRAHIVETYRGHEQEVCGLKWSASGQQLASGGNDNLLYIWDRGTSTSSSP
TQWLHRLEDHTSAVKALAWCPFQGNLLATGGGSGDRTIKFWNTHTGACLNSVDTGSQVCS
LLWNKNERELLSSHGFAQNQLTLWKYPSMVKMAELNGHTSRVLYMAQSPDGCTVATAAAD
ETLRFWNAFGTPEVVAKAAPKARAEPFSHVSRIR
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaggttctttgagttctcccgccatcaaaacccaatcacgttttcctcttcag
gaacacttacagagaaagagttccaaagagaatttggacagatttataccgaatagatcg
gctatggattttgattatgcacactacatggtgacagaaggggctaaaggtaaggaaaat
ccagaagtgtgctccccttccagagaagcttataggaagctacttgcagaatctttaaac
atgaacaggaccagaattctagctttcaagaacaagccacctactccagttgattcgatt
cctcatgaacttacttcatcatctcttcaagaagataaaaccataaagcccaggcgaatt
attcctcagacttctgagaggacattggatgctccagacctagtggatgactattacctt
aatttactggattggggaagcgccaatgttcttgcaatagcacttggaaacacagtgtat
ttgtgggatgcatcaaatggttctacttcagaacttgttactgtcgaagaagaagacggc
cctatcacttctgtgagttgggctcctgatgggcgtcatattggtattggtttgaacaac
tctgaagtgcagctatgggatacagcttcagataaacagttgagaactttgaaaggtggt
cataggcagcgagtagggtctttggcatggaacaaccacatactcacaaccggagggatg
gacggtaaaattatcaataatgatgtaagaattagagcacacattgttgaaacatacaga
gggcatgaacaagaagtttgtggattgaaatggtcggcttccggtcaacaattagccagt
ggagggaatgataatctactttacatctgggacagaggtacatcaacttctagttctcct
acacagtggcttcacaggcttgaagatcatacatctgcagtaaaggctcttgcttggtgt
ccattccaagggaatttgctagctactggtggaggcagtggcgatcgaaccatcaagttt
tggaatacacacacaggtgcatgcctgaactcggttgacaccgggtctcaggtatgttcc
ctactatggaacaagaatgaaagggagttgctcagctctcatggttttgctcagaatcag
ctaacactttggaaatatccttcaatggtcaagatggcagagctcaatggtcatacttca
agagttctttatatggcacagagtccggatggttgtacagtggcaacagcagcggcggat
gaaacattgaggttttggaatgcttttggcactccagaagtagtagccaaagctgcacca
aaagcgagagctgagccattttcacatgtaagccgcattcgatga
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