Medicago truncatula (barrel medic): 11440004
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Entry
11440004 CDS
T01716
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
11440004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mtr03041
]
11440004
Spliceosome [BR:
mtr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
11440004
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
11440004
NCBI-ProteinID:
XP_003622426
UniProt:
A2Q2G1
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Position
7:complement(14072452..14079274)
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AA seq
484 aa
AA seq
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MATLADTFLADLDELSDNEAEIPADNDADAADMDEDVDGDLADLENLNYDDLDSVSKLQQ
TQRYVDVMQKVEEALKKGSDVSQGLDLEDDPEYQLIVECNALSVDIENEIVIIHNFIRDK
YRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTTGKPL
PEEVLSKTIEACDRALALDSAKKKVLDFVESRMGYIAPNVSAIVGSAVAAKLMGTAGGLS
ALAKMPACNVQLLGAKKKNLAGFSTATSQFHVGYIEQTEIFQTTPPSFRMRACRLVAAKS
TLAARVDSIRGDPSGKTGRSLKDEIHKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL
RKMKERYAITDMRKLANRMQFGIPEESSLGDGLGEGYGMLGQAGSGKLRVSAGQSKLAAK
VAKKFKEKSYGSSGATSGLTSSLAFTPVQGIELSNPQAHAHQLGSGTQSTYFSETGTFSK
IQKN
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggctactctcgctgatacttttcttgctgatcttgatgaactctccgataacgaagct
gaaattccagctgataatgatgccgatgcggcggacatggatgaagatgttgatggtgat
cttgctgacttagaaaaccttaattacgatgatttggatagtgtttccaagttgcaacaa
actcagagatacgtcgatgttatgcagaaagtggaagaagcccttaaaaagggttcagat
gtctctcaggggttagacttagaagatgatccagaataccaattaattgtggagtgcaat
gcgttgtcagttgacatcgagaatgagatcgtcattattcataattttattcgcgacaag
tatcggctgaaatttccagagcttgagtcactagtacatcatccaatcgattatgcacgt
gttgttaagaagataggaaatgaaatggatctgacccttgttgatttagaagggctttta
ccctcagccattatcatggttgtctcagttacagcgtcaactacgactggcaagcctctt
ccggaagaagtccttagtaagacaattgaggcttgtgatcgagcccttgctcttgattca
gctaagaagaaagttcttgattttgtagaaagtagaatgggttacattgcgcctaatgtt
tcagctatagttgggagtgctgttgcggctaaactcatgggaacggctggtggcctatca
gctcttgcaaagatgcctgcctgtaatgttcagcttctaggagccaagaaaaaaaatctc
gccgggttctccactgcaacgtcacaatttcatgtcggttacatcgagcaaaccgaaata
tttcagactaccccaccttctttcaggatgcgagcatgccgactcgtggctgcaaagtct
acacttgcagcacgtgtagactcaatacgtggcgacccatctgggaaaactggaagatct
ctcaaggacgagatccataaaaaaattgagaagtggcaagaaccccctcctgctaaacaa
cccaaaccacttccagtgcctgattctgagcctaaaaagaagagaggtggtcgcagactt
aggaagatgaaggagcggtatgcaataacggacatgaggaagttagctaataggatgcaa
tttggaattcctgaagagagctctttaggggacggtctgggtgagggttatggaatgctg
ggtcaggctggcagtggcaagcttcgtgtttcagcaggtcaaagcaaacttgctgcaaaa
gttgctaagaaattcaaggaaaagagttatggtagcagtggtgctacatctggtttaacc
tcaagtcttgcatttactccagtgcaggggattgagctctcaaatccacaggctcatgca
caccaacttggtagtggaactcaaagcacctacttctctgaaacaggaacgttttcaaag
atccagaagaattga
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