Medicago truncatula (barrel medic): 11440396
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Entry
11440396 CDS
T01716
Name
(RefSeq) ATP-dependent helicase BRM
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
11440396
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mtr03021
]
11440396
03036 Chromosome and associated proteins [BR:
mtr03036
]
11440396
Transcription machinery [BR:
mtr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
11440396
Chromosome and associated proteins [BR:
mtr03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
11440396
Chromatin remodeling factors
BAF complex
11440396
PBAF complex
11440396
GBAF(ncBAF) complex
11440396
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
QLQ
ResIII
DEAD
Bromodomain
HDA2-3
AAA_14
AT_hook
Motif
Other DBs
NCBI-GeneID:
11440396
NCBI-ProteinID:
XP_003627563
UniProt:
G7LBQ1
LinkDB
All DBs
Position
8:complement(11317566..11329104)
Genome browser
AA seq
2208 aa
AA seq
DB search
MQSGGGGPGRTAGRASTPSAAASPSSSSSASQLGFESLQQQHQQQQQQHQQQQQQQQIGS
RQSFQQQLLRKPEGNEAFLAYQAGRQGVFGSNNFQQPNAMQLPQQSGKFVNLAQHGSNQD
GQLRGQGSEQQQMINPVQQAYLQYAFQAAQQKQPALGIHSQQQAKMGMLNPASVKDQEMR
MGNLKMQEAMSMQAVNQAQGSSSRNSSEHNARGEKQMEQGQQIRPIQAPEAQQGSVQNVM
NTQIAVAHQLQMMQAWARENNIDLSHPTNANLMAKLIPMMQSRMVLPPKAGESNVGAQSS
PVPVSKQQVNSPAVASESSAHANSSSDVSGQSGSSKARHTVPPSHLGPTTNAGHSSDMAM
QQFNIHGRESQAPLRQQVKAGNGMPSMHSQQSSAAMNLGAADHSLNVKGLSSSAEPPQMQ
YIRQLNQSTAQAGGPTKEGGSRNNAKSQVPPAQMPERQSAFTKQQLHVLKAQILAFRRIK
KGEGMLPPELLQAITPPPLEVQAEQPNQPAGGQNQVRSAGHIAAEQPRHVEANAKESKSI
PAVNGHSSVKQESFSREEKSAPPPVHIQAVMPSMSKESASTSSAGKEEQKTIGSSFKPKQ
DSEHGNNSTPVRNESALDRGKAIAPQASVSDTMQITKPAQATTVSQPKDVGPARKYHGPL
FDFPFFTRKHDSFGSSMMVNNNNNLSLAYDVKDLLSEEGAEVLNKKRTENLKKIEGLLAV
NLERKRIRPDLVLRLQIEEKKLRLLDVQARLRDEIDQQQQEIMAMPDRPYRKFVRLCERQ
RMELVRQVQASQKAAREKQLKSIFLWRKKLLEAHWAIRDARTARNRGVGKYHERMLREFS
KHKDDDRSKRLEALKNNDVDRYREMLLEQQTSIPGDAAERYTVLSSFLSQTEEYLHKLGS
KITAAKNQQEVEEAAKAAADAARLQGLSEEEVRAAAACAGEEVMIRNRFLEMNAPRDSSS
VNKYYNLAHAVNEMVIRQPSLLRAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTV
QVMALIAYLMEFKGNYGPHLIIVPNAVMVNWKSELYKWLPSVSCIFYAGGKDYRTKLFHQ
VSALKFNVLVTTYEFIMYDRAKLSKIDWKYIVIDEAQRMKDRDSVLARDLDRYRCQRRLL
LTGTPLQNDLKELWSLLNLLLPEVFDNKKAFHDWFSKPFQKEGATQNAEDDWLETEKKVI
TIHRLHQILEPFMLRRRVEDVEGSLPPKDSIVLRCKMSSVQSAIYDWVKSTGTLRLDPED
EERKVQRNPNYQLKQYKTLNNRCMELRKTCNHPLLNYPFFSDLSKEFIVKSCGKLWILDR
ILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAINDFNGPDS
DCFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKRPVKVIYMEAV
VDKIPSHQKEDEMRGRGTVDLEDELAGKDRYIGSIEGLIRNNIQQYKIDMADEVINAGRF
DQRTTHEERRLTLETLLHDDERYQETVHDVPSLQEVNRMIARSEEEVELFDQMDDELDWI
EEMTCYDHVPKWIRANSKEVNAAIGALSKRPLKKTLLGGSIAVNPSELGSERKRGRPKKH
TSYKELDDEDLEYSEASSEERNGSANEEGEAGDFEDDGYSGADGAQPIAKDQLENSMLCD
GGYEFPPSLEMVRNNQVVQDAGSSGSSADCQKLTQIVSPSISAQKFGSLSALDARPGSIS
KRMTDELEEGEIAVSFDSHMEHQQSGSWIHDRDEGEDEQVLQKPRIKRKRSIRVRPRHAT
EKPEDKSGSETIPRLSVQADRKYQAQLRADLESKSHVESNASRNEQNSSIKNKRTLPSRR
VANTSKLHSSPKPTRLSAPSEDGGEHSRESWEGKPINSSGSSAHGSRMTEIIQRRCKNVI
SKLQRRIDKEGHQIVPLLTDLWKRIENSGYSGGSGNNLLDLRKIDQRIDKLEYTGATDLV
FDVQFMLKSAMQYYGFSLEVRTEARKVHNLFFDILKIAFPDTDFQDAKSALSFTGPISAP
TMVSSPRQVAVGQGKRHRLVNEVEPDSHPSQRQLQRGSASSGENSRIRVRVPPKESRSGY
GSGSSIREQPQQQDDSPPLLTHPGELVVCKKRRNEREKSLVKSRTGPVSPSMRSPGAGSV
PKDVRLTQQTQGWTGQPSSQQPNGGSVGWANPVKRLRTDSGKRRPSHM
NT seq
6627 nt
NT seq
+upstream
nt +downstream
nt
atgcagtctggtggtggtggacctggccggacggcggggcgggcgtcgacaccgtcggca
gctgcttcgccgtcttcgtcttcttcggcttcacagttagggtttgaatctttgcagcaa
caacaccaacaacagcagcagcaacaccaacagcagcagcaacagcagcagataggttct
aggcagtcatttcaacagcaactgcttagaaaacctgaagggaatgaagcatttttagct
tatcaagcagggcgtcaaggtgtatttgggagtaacaatttccaacaacctaatgctatg
cagctgcctcagcagtctggaaaatttgttaatttagctcaacatggttcaaaccaagat
ggccagctcagaggtcaaggtagcgagcagcagcaaatgataaaccctgtccaacaagca
taccttcaatatgcttttcaggctgcgcaacaaaagcagcctgctttgggaattcattcg
caacaacaagctaagatgggaatgttaaaccctgcatctgtaaaggatcaggaaatgcga
atgggaaatctgaaaatgcaagaagctatgtcaatgcaggcagtcaatcaagctcaagga
tcatcctctaggaattcatctgaacacaatgctcgtggagaaaagcagatggagcaaggg
cagcagataagacctattcaagcaccagaagcacagcagggcagcgttcaaaatgttatg
aacacccagattgcggtagctcatcaattgcagatgatgcaagcatgggcacgtgaaaat
aatatcgatttatcacatcctacgaatgcaaatttaatggcaaagctcattccaatgatg
cagtcgaggatggtcttaccaccaaaggcaggtgagagcaacgttggtgcgcagtcgtca
cctgtccctgtttcaaagcagcaggttaattctccagctgttgcaagtgagagctcagca
catgctaattcatcaagcgatgtgtctgggcagtcaggttcttcgaaagctaggcatact
gttccccccagccatcttggcccaacaacaaatgctggtcactccagtgacatggccatg
cagcaatttaatattcatggtagagagtctcaagctcctctgaggcaacaagtaaaagct
ggaaatggaatgccttctatgcattctcagcaatcttctgcagccatgaacttaggtgca
gcagaccattctttgaatgtcaaaggtttatcttctagtgcagaacctcctcaaatgcag
tatatcaggcagttaaaccaatctactgctcaggccggaggtccaacaaaagaagggggt
tcgagaaataatgctaaatctcaagtgccacctgctcagatgcctgagcgacaaagtgca
tttaccaaacaacagctacatgttcttaaagcacagatactagcatttaggaggataaag
aaaggagaaggaatgctgcctccagaacttcttcaagctatcactccaccgcctcttgag
gtgcaggcagaacaaccaaaccagcctgcgggaggacaaaatcaagtcagatctgctgga
catattgctgcagaacaaccacggcatgttgaggccaatgccaaagaatcaaaatctatt
cctgccgttaatggccacagttctgtaaagcaggaatccttttcaagagaggagaaatcg
gctccaccaccagttcatattcaagctgttatgccatctatgtctaaggaatctgcttcg
acatcatctgcgggaaaggaagagcagaaaacaattggatcctcttttaagccaaagcag
gacagtgaacatggaaataacagtactcctgttagaaatgagtcggcattagatagggga
aaggctattgcacctcaggcctctgtatctgacacgatgcaaattacaaaacctgcacaa
gcaaccactgtttctcagccgaaggatgtgggaccagccagaaaatatcacggacccctg
tttgattttcctttcttcactaggaaacatgactcttttgggtcgtcaatgatggtaaac
aacaacaacaatttatcactggcatatgatgtcaaagatcttctttctgaggaaggcgct
gaagtacttaacaaaaagcggacagaaaatttaaagaagattgaaggtttactggctgta
aatttggagaggaaacgaattaggcctgatcttgtgttgagacttcaaattgaagagaaa
aagctccgccttttagatgttcaggcacgtttgagggatgagattgatcaacagcaacaa
gagataatggcaatgcctgataggccatatcgtaagttcgttaggctgtgtgaacgtcag
cgtatggaacttgttagacaagtgcaggcgtctcagaaagctgcaagggagaagcaactc
aaatctatatttctatggcgtaagaaacttcttgaggcacactgggcaattcgtgatgcc
cgtactgcccgcaacaggggggtgggtaaatatcatgagaggatgttgagggaattctca
aaacataaagatgacgatagaagcaaaaggttagaagccttaaaaaacaatgatgttgac
agatatagggagatgttgctggagcagcagactagcattccgggtgatgctgcagagaga
tatactgttctttcatctttcttaagccagactgaagagtatctacataaattaggaagc
aagataacagctgccaaaaatcaacaggaagtagaggaggcagcaaaagcagctgcggat
gctgcacggttgcagggtctttctgaagaagaagtcagagctgctgctgcttgtgccgga
gaggaagtgatgattaggaatcgttttctggagatgaatgctcctagagacagttcatcc
gtcaacaagtattacaacctcgcacatgcagtgaatgaaatggtcataagacaaccatcc
ctattacgagctggaacattgagagactatcagcttgttggattacaatggatgctttct
ttgtacaacaacaaattaaatggaattttagcagatgaaatgggtcttggcaaaactgta
caggttatggcattgattgcatacttgatggaattcaaaggaaactatggcccacatctc
ataatagtcccaaatgctgtcatggttaactggaagagtgagttatataagtggttgcca
tctgtgtcgtgcatcttttatgctggagggaaggattatcgaacaaaattatttcatcaa
gtttctgctctgaaatttaatgtcttggtgactacttatgagttcatcatgtatgaccgg
gcaaagctttcaaaaattgattggaagtatatcgtgattgatgaagcacaaagaatgaag
gatagagattcagttttagctcgtgatcttgataggtatcgttgtcaaagacgtctgctt
ttgacaggaacaccgttgcagaatgatttgaaggaactctggtcacttttaaacttactt
cttcctgaggtttttgacaacaagaaagcctttcatgattggttctcaaaaccatttcaa
aaggaaggtgctactcaaaatgcagaggatgattggcttgagacagagaagaaagtcatc
acaatccatcgacttcatcagattcttgaacctttcatgctcaggcgacgagttgaagat
gtcgaaggctcactaccaccaaaggactcaatagttttacgatgtaaaatgtcatctgtc
cagagtgctatttatgactgggtcaaatcaactggtacccttcgtcttgatcccgaggat
gaggaacgcaaggttcagaggaatcctaactaccagctgaagcaatataaaactttaaac
aaccgatgcatggagctaaggaaaacttgcaatcatccgttgcttaattacccattcttc
agcgacttatctaaagaattcattgtaaaatcttgtggaaaattgtggatcctggatagg
atcctcataaaacttcaaaggaccggacatcgtgttctactattcagtaccatgacaaaa
cttcttgatatattggaagaatacctgcagtggcgaagacttgtgtacagaagaattgac
gggacaactagtttagaagaccgtgaatcagctataaacgacttcaatggccctgattca
gactgttttatcttcctgcttagcattcgagctgctggaagaggccttaaccttcagtct
gctgacacagttgttatttatgaccctgatccaaatcctaaaaatgaggagcaggctgtt
gccagagctcatcgcattggacagaaaagaccagtcaaggttatctacatggaagcagtt
gtcgacaaaatacctagtcatcagaaggaagatgaaatgagaggtagaggcactgtcgat
ctggaggatgaacttgccggcaaggatcgctacataggatccattgagggcctcataagg
aacaacattcagcaatataagatagatatggctgatgaggtgattaatgccggacgtttc
gatcaaagaacaacacacgaagaaaggcgtttgactttggagacattgttacatgatgat
gagaggtatcaagaaactgtccatgatgttccatcattgcaggaggtaaatcgtatgatt
gctaggagtgaagaggaagttgaactcttcgatcaaatggatgatgaactggattggatt
gaagagatgacgtgttatgatcatgtgcctaaatggattcgtgccaattcaaaagaagtt
aatgctgctataggtgctttatcaaaaagaccgttgaagaaaactttattgggtggtagt
attgccgtgaatccaagtgaacttggttcagaaaggaaaagaggccgacccaaaaagcat
acaagttataaagagctggatgatgaagatttggaatactctgaagcaagctctgaagaa
agaaatggatctgcaaatgaagaaggggaagcaggagatttcgaagatgatgggtatagt
ggagctgatggagctcagcccattgctaaagatcaactggaaaatagtatgctttgtgac
ggtggatatgaatttcctccatctttagaaatggtcagaaataatcaagtggttcaagac
gctggttcttctggatcatcggccgactgtcaaaaattgacacagatagtatcaccatca
atttccgctcagaaatttggttccctgtcagcattagatgcccggccaggttccatttca
aaaagaatgacagatgagttagaggaaggagaaatagcagtatcctttgattcacacatg
gagcatcaacagtctggaagttggattcatgatcgtgatgaaggtgaggatgagcaagtt
ttgcagaaaccgaggattaaacgcaaacgtagtattcgtgttcgaccccgtcatgccact
gaaaaacctgaggataagtctggtagtgaaacgattcctcgtttgtcagttcaagcagac
cgtaaatatcaagcacagctgagggctgacctagaatcgaaatcacatgtagagtccaat
gctagcaggaatgagcaaaattcttcaataaaaaataagcgtaccttaccttcaaggagg
gttgctaatacatccaaattacatagctcaccaaagcctactcgtttgtctgctccttca
gaggatggtggtgaacattctagggaaagctgggaggggaagcctatcaattcaagtgga
tcttctgctcatggctctaggatgacagaaatcatccagagaaggtgcaaaaatgtaatt
agcaagctccaaaggaggatagacaaggaaggccatcaaattgtacctctgttaacagat
ttgtggaagaggattgagaattctgggtacagtggtggatctgggaataatctgttggat
ttacgaaagattgatcaacgaattgataaattggagtatactggagcaacagatcttgta
tttgacgtccagttcatgttaaagagcgcgatgcaatattatggtttttcccttgaggta
agaactgaagcaaggaaggttcataatctcttttttgatatattgaaaattgcatttcct
gatactgacttccaagacgcaaaaagtgcactctctttcactggtccaatctctgccccc
accatggtatcgtctccaaggcaagtggctgttggccaaggcaagaggcacaggctggta
aatgaggtggagccggattcacacccttcacagaggcagctacagcgcggatcagcttct
agcggtgaaaacagcaggattagagtccgtgtcccaccaaaggaatcaagatccggatat
ggtagcggtagcagtattcgagagcaacctcagcagcaggatgattctcctccactactc
actcatccaggcgaacttgttgtatgcaagaaaagaagaaatgagagggagaaatcattg
gtgaagtctcggactggtcctgtttcaccatctatgagaagtcctggggcaggttcagtc
cctaaggatgttagattaactcaacagactcaagggtggactggccaaccatcttctcaa
caaccaaatggtgggtcagttgggtgggccaatcctgtaaagaggctaagaacagattcc
ggtaagaggcgaccaagtcatatgtaa
DBGET
integrated database retrieval system
