Medicago truncatula (barrel medic): 11440396
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Entry
11440396 CDS
T01716
Name
(RefSeq) ATP-dependent helicase BRM
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
11440396
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mtr03021
]
11440396
03036 Chromosome and associated proteins [BR:
mtr03036
]
11440396
Transcription machinery [BR:
mtr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
11440396
Chromosome and associated proteins [BR:
mtr03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
11440396
Chromatin remodeling factors
BAF complex
11440396
PBAF complex
11440396
GBAF(ncBAF) complex
11440396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
QLQ
ResIII
DEAD
Bromodomain
HDA2-3
AAA_14
AT_hook
Motif
Other DBs
NCBI-GeneID:
11440396
NCBI-ProteinID:
XP_003627563
UniProt:
G7LBQ1
LinkDB
All DBs
Position
8:complement(11317566..11329104)
Genome browser
AA seq
2208 aa
AA seq
DB search
MQSGGGGPGRTAGRASTPSAAASPSSSSSASQLGFESLQQQHQQQQQQHQQQQQQQQIGS
RQSFQQQLLRKPEGNEAFLAYQAGRQGVFGSNNFQQPNAMQLPQQSGKFVNLAQHGSNQD
GQLRGQGSEQQQMINPVQQAYLQYAFQAAQQKQPALGIHSQQQAKMGMLNPASVKDQEMR
MGNLKMQEAMSMQAVNQAQGSSSRNSSEHNARGEKQMEQGQQIRPIQAPEAQQGSVQNVM
NTQIAVAHQLQMMQAWARENNIDLSHPTNANLMAKLIPMMQSRMVLPPKAGESNVGAQSS
PVPVSKQQVNSPAVASESSAHANSSSDVSGQSGSSKARHTVPPSHLGPTTNAGHSSDMAM
QQFNIHGRESQAPLRQQVKAGNGMPSMHSQQSSAAMNLGAADHSLNVKGLSSSAEPPQMQ
YIRQLNQSTAQAGGPTKEGGSRNNAKSQVPPAQMPERQSAFTKQQLHVLKAQILAFRRIK
KGEGMLPPELLQAITPPPLEVQAEQPNQPAGGQNQVRSAGHIAAEQPRHVEANAKESKSI
PAVNGHSSVKQESFSREEKSAPPPVHIQAVMPSMSKESASTSSAGKEEQKTIGSSFKPKQ
DSEHGNNSTPVRNESALDRGKAIAPQASVSDTMQITKPAQATTVSQPKDVGPARKYHGPL
FDFPFFTRKHDSFGSSMMVNNNNNLSLAYDVKDLLSEEGAEVLNKKRTENLKKIEGLLAV
NLERKRIRPDLVLRLQIEEKKLRLLDVQARLRDEIDQQQQEIMAMPDRPYRKFVRLCERQ
RMELVRQVQASQKAAREKQLKSIFLWRKKLLEAHWAIRDARTARNRGVGKYHERMLREFS
KHKDDDRSKRLEALKNNDVDRYREMLLEQQTSIPGDAAERYTVLSSFLSQTEEYLHKLGS
KITAAKNQQEVEEAAKAAADAARLQGLSEEEVRAAAACAGEEVMIRNRFLEMNAPRDSSS
VNKYYNLAHAVNEMVIRQPSLLRAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTV
QVMALIAYLMEFKGNYGPHLIIVPNAVMVNWKSELYKWLPSVSCIFYAGGKDYRTKLFHQ
VSALKFNVLVTTYEFIMYDRAKLSKIDWKYIVIDEAQRMKDRDSVLARDLDRYRCQRRLL
LTGTPLQNDLKELWSLLNLLLPEVFDNKKAFHDWFSKPFQKEGATQNAEDDWLETEKKVI
TIHRLHQILEPFMLRRRVEDVEGSLPPKDSIVLRCKMSSVQSAIYDWVKSTGTLRLDPED
EERKVQRNPNYQLKQYKTLNNRCMELRKTCNHPLLNYPFFSDLSKEFIVKSCGKLWILDR
ILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAINDFNGPDS
DCFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKRPVKVIYMEAV
VDKIPSHQKEDEMRGRGTVDLEDELAGKDRYIGSIEGLIRNNIQQYKIDMADEVINAGRF
DQRTTHEERRLTLETLLHDDERYQETVHDVPSLQEVNRMIARSEEEVELFDQMDDELDWI
EEMTCYDHVPKWIRANSKEVNAAIGALSKRPLKKTLLGGSIAVNPSELGSERKRGRPKKH
TSYKELDDEDLEYSEASSEERNGSANEEGEAGDFEDDGYSGADGAQPIAKDQLENSMLCD
GGYEFPPSLEMVRNNQVVQDAGSSGSSADCQKLTQIVSPSISAQKFGSLSALDARPGSIS
KRMTDELEEGEIAVSFDSHMEHQQSGSWIHDRDEGEDEQVLQKPRIKRKRSIRVRPRHAT
EKPEDKSGSETIPRLSVQADRKYQAQLRADLESKSHVESNASRNEQNSSIKNKRTLPSRR
VANTSKLHSSPKPTRLSAPSEDGGEHSRESWEGKPINSSGSSAHGSRMTEIIQRRCKNVI
SKLQRRIDKEGHQIVPLLTDLWKRIENSGYSGGSGNNLLDLRKIDQRIDKLEYTGATDLV
FDVQFMLKSAMQYYGFSLEVRTEARKVHNLFFDILKIAFPDTDFQDAKSALSFTGPISAP
TMVSSPRQVAVGQGKRHRLVNEVEPDSHPSQRQLQRGSASSGENSRIRVRVPPKESRSGY
GSGSSIREQPQQQDDSPPLLTHPGELVVCKKRRNEREKSLVKSRTGPVSPSMRSPGAGSV
PKDVRLTQQTQGWTGQPSSQQPNGGSVGWANPVKRLRTDSGKRRPSHM
NT seq
6627 nt
NT seq
+upstream
nt +downstream
nt
atgcagtctggtggtggtggacctggccggacggcggggcgggcgtcgacaccgtcggca
gctgcttcgccgtcttcgtcttcttcggcttcacagttagggtttgaatctttgcagcaa
caacaccaacaacagcagcagcaacaccaacagcagcagcaacagcagcagataggttct
aggcagtcatttcaacagcaactgcttagaaaacctgaagggaatgaagcatttttagct
tatcaagcagggcgtcaaggtgtatttgggagtaacaatttccaacaacctaatgctatg
cagctgcctcagcagtctggaaaatttgttaatttagctcaacatggttcaaaccaagat
ggccagctcagaggtcaaggtagcgagcagcagcaaatgataaaccctgtccaacaagca
taccttcaatatgcttttcaggctgcgcaacaaaagcagcctgctttgggaattcattcg
caacaacaagctaagatgggaatgttaaaccctgcatctgtaaaggatcaggaaatgcga
atgggaaatctgaaaatgcaagaagctatgtcaatgcaggcagtcaatcaagctcaagga
tcatcctctaggaattcatctgaacacaatgctcgtggagaaaagcagatggagcaaggg
cagcagataagacctattcaagcaccagaagcacagcagggcagcgttcaaaatgttatg
aacacccagattgcggtagctcatcaattgcagatgatgcaagcatgggcacgtgaaaat
aatatcgatttatcacatcctacgaatgcaaatttaatggcaaagctcattccaatgatg
cagtcgaggatggtcttaccaccaaaggcaggtgagagcaacgttggtgcgcagtcgtca
cctgtccctgtttcaaagcagcaggttaattctccagctgttgcaagtgagagctcagca
catgctaattcatcaagcgatgtgtctgggcagtcaggttcttcgaaagctaggcatact
gttccccccagccatcttggcccaacaacaaatgctggtcactccagtgacatggccatg
cagcaatttaatattcatggtagagagtctcaagctcctctgaggcaacaagtaaaagct
ggaaatggaatgccttctatgcattctcagcaatcttctgcagccatgaacttaggtgca
gcagaccattctttgaatgtcaaaggtttatcttctagtgcagaacctcctcaaatgcag
tatatcaggcagttaaaccaatctactgctcaggccggaggtccaacaaaagaagggggt
tcgagaaataatgctaaatctcaagtgccacctgctcagatgcctgagcgacaaagtgca
tttaccaaacaacagctacatgttcttaaagcacagatactagcatttaggaggataaag
aaaggagaaggaatgctgcctccagaacttcttcaagctatcactccaccgcctcttgag
gtgcaggcagaacaaccaaaccagcctgcgggaggacaaaatcaagtcagatctgctgga
catattgctgcagaacaaccacggcatgttgaggccaatgccaaagaatcaaaatctatt
cctgccgttaatggccacagttctgtaaagcaggaatccttttcaagagaggagaaatcg
gctccaccaccagttcatattcaagctgttatgccatctatgtctaaggaatctgcttcg
acatcatctgcgggaaaggaagagcagaaaacaattggatcctcttttaagccaaagcag
gacagtgaacatggaaataacagtactcctgttagaaatgagtcggcattagatagggga
aaggctattgcacctcaggcctctgtatctgacacgatgcaaattacaaaacctgcacaa
gcaaccactgtttctcagccgaaggatgtgggaccagccagaaaatatcacggacccctg
tttgattttcctttcttcactaggaaacatgactcttttgggtcgtcaatgatggtaaac
aacaacaacaatttatcactggcatatgatgtcaaagatcttctttctgaggaaggcgct
gaagtacttaacaaaaagcggacagaaaatttaaagaagattgaaggtttactggctgta
aatttggagaggaaacgaattaggcctgatcttgtgttgagacttcaaattgaagagaaa
aagctccgccttttagatgttcaggcacgtttgagggatgagattgatcaacagcaacaa
gagataatggcaatgcctgataggccatatcgtaagttcgttaggctgtgtgaacgtcag
cgtatggaacttgttagacaagtgcaggcgtctcagaaagctgcaagggagaagcaactc
aaatctatatttctatggcgtaagaaacttcttgaggcacactgggcaattcgtgatgcc
cgtactgcccgcaacaggggggtgggtaaatatcatgagaggatgttgagggaattctca
aaacataaagatgacgatagaagcaaaaggttagaagccttaaaaaacaatgatgttgac
agatatagggagatgttgctggagcagcagactagcattccgggtgatgctgcagagaga
tatactgttctttcatctttcttaagccagactgaagagtatctacataaattaggaagc
aagataacagctgccaaaaatcaacaggaagtagaggaggcagcaaaagcagctgcggat
gctgcacggttgcagggtctttctgaagaagaagtcagagctgctgctgcttgtgccgga
gaggaagtgatgattaggaatcgttttctggagatgaatgctcctagagacagttcatcc
gtcaacaagtattacaacctcgcacatgcagtgaatgaaatggtcataagacaaccatcc
ctattacgagctggaacattgagagactatcagcttgttggattacaatggatgctttct
ttgtacaacaacaaattaaatggaattttagcagatgaaatgggtcttggcaaaactgta
caggttatggcattgattgcatacttgatggaattcaaaggaaactatggcccacatctc
ataatagtcccaaatgctgtcatggttaactggaagagtgagttatataagtggttgcca
tctgtgtcgtgcatcttttatgctggagggaaggattatcgaacaaaattatttcatcaa
gtttctgctctgaaatttaatgtcttggtgactacttatgagttcatcatgtatgaccgg
gcaaagctttcaaaaattgattggaagtatatcgtgattgatgaagcacaaagaatgaag
gatagagattcagttttagctcgtgatcttgataggtatcgttgtcaaagacgtctgctt
ttgacaggaacaccgttgcagaatgatttgaaggaactctggtcacttttaaacttactt
cttcctgaggtttttgacaacaagaaagcctttcatgattggttctcaaaaccatttcaa
aaggaaggtgctactcaaaatgcagaggatgattggcttgagacagagaagaaagtcatc
acaatccatcgacttcatcagattcttgaacctttcatgctcaggcgacgagttgaagat
gtcgaaggctcactaccaccaaaggactcaatagttttacgatgtaaaatgtcatctgtc
cagagtgctatttatgactgggtcaaatcaactggtacccttcgtcttgatcccgaggat
gaggaacgcaaggttcagaggaatcctaactaccagctgaagcaatataaaactttaaac
aaccgatgcatggagctaaggaaaacttgcaatcatccgttgcttaattacccattcttc
agcgacttatctaaagaattcattgtaaaatcttgtggaaaattgtggatcctggatagg
atcctcataaaacttcaaaggaccggacatcgtgttctactattcagtaccatgacaaaa
cttcttgatatattggaagaatacctgcagtggcgaagacttgtgtacagaagaattgac
gggacaactagtttagaagaccgtgaatcagctataaacgacttcaatggccctgattca
gactgttttatcttcctgcttagcattcgagctgctggaagaggccttaaccttcagtct
gctgacacagttgttatttatgaccctgatccaaatcctaaaaatgaggagcaggctgtt
gccagagctcatcgcattggacagaaaagaccagtcaaggttatctacatggaagcagtt
gtcgacaaaatacctagtcatcagaaggaagatgaaatgagaggtagaggcactgtcgat
ctggaggatgaacttgccggcaaggatcgctacataggatccattgagggcctcataagg
aacaacattcagcaatataagatagatatggctgatgaggtgattaatgccggacgtttc
gatcaaagaacaacacacgaagaaaggcgtttgactttggagacattgttacatgatgat
gagaggtatcaagaaactgtccatgatgttccatcattgcaggaggtaaatcgtatgatt
gctaggagtgaagaggaagttgaactcttcgatcaaatggatgatgaactggattggatt
gaagagatgacgtgttatgatcatgtgcctaaatggattcgtgccaattcaaaagaagtt
aatgctgctataggtgctttatcaaaaagaccgttgaagaaaactttattgggtggtagt
attgccgtgaatccaagtgaacttggttcagaaaggaaaagaggccgacccaaaaagcat
acaagttataaagagctggatgatgaagatttggaatactctgaagcaagctctgaagaa
agaaatggatctgcaaatgaagaaggggaagcaggagatttcgaagatgatgggtatagt
ggagctgatggagctcagcccattgctaaagatcaactggaaaatagtatgctttgtgac
ggtggatatgaatttcctccatctttagaaatggtcagaaataatcaagtggttcaagac
gctggttcttctggatcatcggccgactgtcaaaaattgacacagatagtatcaccatca
atttccgctcagaaatttggttccctgtcagcattagatgcccggccaggttccatttca
aaaagaatgacagatgagttagaggaaggagaaatagcagtatcctttgattcacacatg
gagcatcaacagtctggaagttggattcatgatcgtgatgaaggtgaggatgagcaagtt
ttgcagaaaccgaggattaaacgcaaacgtagtattcgtgttcgaccccgtcatgccact
gaaaaacctgaggataagtctggtagtgaaacgattcctcgtttgtcagttcaagcagac
cgtaaatatcaagcacagctgagggctgacctagaatcgaaatcacatgtagagtccaat
gctagcaggaatgagcaaaattcttcaataaaaaataagcgtaccttaccttcaaggagg
gttgctaatacatccaaattacatagctcaccaaagcctactcgtttgtctgctccttca
gaggatggtggtgaacattctagggaaagctgggaggggaagcctatcaattcaagtgga
tcttctgctcatggctctaggatgacagaaatcatccagagaaggtgcaaaaatgtaatt
agcaagctccaaaggaggatagacaaggaaggccatcaaattgtacctctgttaacagat
ttgtggaagaggattgagaattctgggtacagtggtggatctgggaataatctgttggat
ttacgaaagattgatcaacgaattgataaattggagtatactggagcaacagatcttgta
tttgacgtccagttcatgttaaagagcgcgatgcaatattatggtttttcccttgaggta
agaactgaagcaaggaaggttcataatctcttttttgatatattgaaaattgcatttcct
gatactgacttccaagacgcaaaaagtgcactctctttcactggtccaatctctgccccc
accatggtatcgtctccaaggcaagtggctgttggccaaggcaagaggcacaggctggta
aatgaggtggagccggattcacacccttcacagaggcagctacagcgcggatcagcttct
agcggtgaaaacagcaggattagagtccgtgtcccaccaaaggaatcaagatccggatat
ggtagcggtagcagtattcgagagcaacctcagcagcaggatgattctcctccactactc
actcatccaggcgaacttgttgtatgcaagaaaagaagaaatgagagggagaaatcattg
gtgaagtctcggactggtcctgtttcaccatctatgagaagtcctggggcaggttcagtc
cctaaggatgttagattaactcaacagactcaagggtggactggccaaccatcttctcaa
caaccaaatggtgggtcagttgggtgggccaatcctgtaaagaggctaagaacagattcc
ggtaagaggcgaccaagtcatatgtaa
DBGET
integrated database retrieval system
