Medicago truncatula (barrel medic): 11440470
Help
Entry
11440470 CDS
T01716
Name
(RefSeq) CLIP-associated protein isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mtr03036
]
11440470
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mtr04812
]
11440470
Chromosome and associated proteins [BR:
mtr03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
11440470
Cytoskeleton proteins [BR:
mtr04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
11440470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
HEAT_EF3_N
XMAP215_CLASP_TOG
HEAT
Vac14_Fab1_bd
HEAT_EZ
HEAT_2
TOR1L1_N
Cnd1
INTS1_R4
Adaptin_N
UTP20
HEAT_Maestro
Tti2
MMS19_N
MMS19_C
HEAT_DAAF5
TPR_TTI1_C
Sec7-like_HUS
Dopey_N
Tra1_ring
Motif
Other DBs
NCBI-GeneID:
11440470
NCBI-ProteinID:
XP_003625469
UniProt:
G7KZK2
LinkDB
All DBs
Position
7:46743002..46760294
Genome browser
AA seq
1449 aa
AA seq
DB search
MEEALELTRAKDTKERMAGVERLYHLLEASRKSLSSSEVTSLVDSCIDLLKDNNFRVSQG
ALQSLASAAVLSGEHFKLHFNALLPAVVDRLGDAKQPVRDAARRLLLTLMEVSSPTIIVE
RAGSSAWAHKSWRVREEFTRTVTSAINLFSATELPLQRAILPPVLQLLSDPNLAVREAAI
LCIEEMYTQAGPQFRDELHRYNLPSSMVKDINARLEGIQPKVRSSDGIPSGYITGEIKTS
NVNPKKSSPKAKSSSREASLFGAEGDVTEKPVDPIKIYSDKELVREIEKIASILVPEKDW
SVRIAAMQRIEGLVLGGAADYPCFRGLLKQLGGPLSTQLSDRRSSIVKQACHLLCFLSKE
LLGDFEAYAEMFIPVLFKLVVITVLVIAESADNCIKTMLRNCKVARVLPRIADCAKNDRN
AVLRARCCEYALLVLEHWPDAPEIHRSAELYEDMIKCCVSDAMSEVRSTARMCYRMFAKT
WPERSRRLLSSFDPVIQRLINEEDGGIHRRHASPSIRDRGALTSLSIQASASSNPPGYGT
SAIVAMDRSSSLSSGTSVSSGVLLSQAKSLGKGTERSLESVLHASKQKVTAIESMLRGLN
MSDKHNGSSLRSSSLDLEVDPPSSRDPPFPAAASASNHLTSSSTTEPTAYGVYKGSNRNG
GLGLSDIITQIQATKDSAKSSYHSNVEIEPLPSLSSYSTRRASERLQERSSADDNSDIRE
ARRFINHNTDKQYLDAPYREGNFRESHNSYVPNFQRPLVRKNATGRMSAGRRRSFDDNQL
SLGEISSYSDGPASLHEALSEGLRSGSDWSSRVAAFNYLHSLLQQGPKGTLEVVQNFEKV
MKLFFQHLDDPHHKVAQAALSTLADIVPACRKPFEGYMERILPHVFSRLIDPKEVVRQPC
STTLEVVSKTYSVDSLLPALLRSLDEQRSPKAKLAVIEFAIKSFNKHAMNAEGAANIGIL
KLWLAKLTPLVHDKNTKLKEAAITCIISVYNHFDSTAVLNFILSLSVEEQNSLRRALKQY
TPRIEVDLVNYLQNKKERQRSKSSYDPSDVVGTSSEDGYVGFSRKAHYLGRYSAGSLDSD
GGRKWSSQDSTLLKSSLGPAASVECEDHNHSHNHNLETDSNCDSPGSKPKDLAYSVNPMG
QNFGSQSSQLGQVDSSMNFEGLSTPRLDVNGLISLERLNVGEGYAHDKELPSALELNHHS
TEAVKINSMADTGPSIPQILHMICNADDGSSVSSKQTALQQLFEASTTNDQSVWTKYFNQ
ILTVVLEVLDDSDSSVRELTLSLIVEMLKNQKDALENSVEIVIEKLLHVTKDIVPKVSNE
AEHCLTIVLSQSDPFRCLSVIVPLLVTDDEKTLVTCINCLTKLVGRLSQEELMAQLPSFL
PSLFEAFGNQSADVRKTVVFCLVDIYIMLGKAFLPYLQGLNSTQLKLVTIYANRISQART
GKAIDIVHD
NT seq
4350 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagcgttggaactcacacgcgccaaagacacaaaggaaaggatggctggtgtg
gagcgtctctaccatcttctagaagcttctagaaagagtctttcatcttctgaagttact
tcgcttgttgattcttgcatcgatctcttgaaggataacaatttccgtgtctctcaaggt
gcacttcagtctctcgcttccgccgccgttctctccggcgagcatttcaaacttcacttc
aacgctcttcttcccgccgtcgttgatcgtctcggtgatgctaaacaacctgttcgtgac
gctgcgcgacgactacttctaacgctgatggaggtttcttctcctacaataattgttgaa
agagcaggatcctctgcttgggcacacaaaagctggagagtcagagaggagttcacgcga
actgtaacatctgcaattaatctattttcagctaccgaacttccacttcaacgggctatc
cttcctcctgttttgcagttgctgagtgacccaaatcttgctgttagggaagcagctatt
ttatgcattgaggaaatgtatacacaagccggacctcaatttcgtgatgaacttcaccgc
tacaatcttccttcatctatggtgaaagatattaatgccaggctagaagggattcaacca
aaagttcgctcttcagatggtattccaagtggttatattactggggaaattaagacttca
aatgttaaccccaagaaaagtagtccaaaggccaaaagttcttcaagggaggcctctctt
tttggagcagaaggtgatgtcacggagaaacctgtagaccctatcaagatatactcggat
aaggagttagtcagggaaatcgagaagattgcatctatccttgtgcctgaaaaagactgg
tccgttcgtattgctgctatgcagagaattgaaggtcttgttctaggaggcgctgctgat
tatccatgttttcgtggactcctgaagcaacttggcggacctttaagcacacaattgtca
gacagaagatctagcattgtaaagcaggcttgccatttattatgctttttgtcaaaggaa
ctcttgggtgattttgaagcatatgctgaaatgtttataccagtccttttcaagctggtt
gtgattactgtgcttgtaattgcagagtctgcagataactgcataaaaacgatgctgcgc
aactgcaaggttgctcgtgtgcttccccgtatagctgattgtgctaaaaatgaccgcaat
gcagtgcttcgtgcaaggtgttgtgagtatgctcttttggtcctagaacattggccagat
gcaccagaaatacatcgttcagctgagttatatgaggatatgataaagtgttgtgtttca
gatgcaatgagcgaggtacgatctactgcaaggatgtgctacagaatgttcgcaaaaact
tggccagagcgttctcgtcgcctactttcatcctttgaccctgttatccaacggttaata
aatgaagaggatggaggaatacacaggcgacatgcttcaccttccattcgtgatagaggt
gcactgacgtcattatccattcaagcctctgcttcgtctaatccacctggttatggaaca
tctgcaattgttgcaatggatagaagttcaagtttatcatcggggacatctgtctcttct
ggtgtacttctttcacaggcaaagtcacttggtaagggtacagaacgtagtttggaaagt
gtgttgcatgcaagcaaacagaaggtcactgctattgaaagcatgcttagaggcttgaat
atgtctgataagcataatggatcgtctctccggtcatcaagtttggatctagaagttgac
cctccatcgtctcgtgatccgccttttccagctgctgcctctgcatccaatcatttgaca
agctcttcaacaacagaacctactgcttatggtgtctataaaggtagtaaccgaaatggg
ggtctgggcttgtccgacataatcactcaaattcaagctaccaaagattctgccaagtca
tcatatcatagtaatgttgaaattgagcctttaccatcattatcctcatattcaactaga
agggcttctgaaagattacaagaaaggagttctgctgatgacaatagtgacatcagggag
gctaggcgatttataaaccacaacactgataagcagtatttggatgccccttatagagaa
ggaaactttagggaatcacataatagttatgtgcctaattttcagaggccactagtgaga
aagaatgcaactggacgtatgtctgctggcaggaggaggagttttgatgataaccagcta
tctcttggagaaatttcaagttattcggatggaccagcatctcttcatgaagctttgagt
gaaggacttaggtcaggttctgactggtcttctagggttgctgcctttaactatcttcac
tcgttgttgcagcaaggtccaaagggaactctagaagttgttcagaattttgagaaggta
atgaagttgtttttccagcacttggatgatcctcaccataaagttgcacaggctgctctt
tcaacactagcagatatagttccagcatgtcgaaagccttttgagggatacatggaaaga
atattaccacacgtcttttcccggttaattgatcctaaagaggttgttagacagccatgt
tcaacaacattggaagttgttagcaaaacgtacagtgtcgattctctcttacctgcactg
ttacgttcactagatgagcaaaggtctccaaaggctaaattggccgtgattgaatttgca
atcaaatcctttaacaaacatgcaatgaatgcagaaggtgctgctaatattggcatatta
aaattgtggcttgctaagttaacccctttggttcatgacaagaatacaaagcttaaagaa
gcagctattacatgcattatttcagtgtacaatcactttgattcgaccgcagttcttaat
ttcattctgagtttgtcagtggaagagcaaaattctttgagacgagccctaaaacagtac
acccctcgcattgaagtagacctagtaaactatctacagaacaagaaagagcggcaacgt
tccaagtcttcctatgatccatctgatgttgtaggaacgtcatctgaagatgggtatgtt
ggtttctctaggaaagctcattaccttggaagatattcggctggttccctagatagtgat
ggtggcaggaagtggagctctcaggattcaactcttttgaaatcgagtcttggtccagca
gcttctgttgaatgtgaggatcataatcatagtcataaccataatcttgagactgattct
aattgtgacagtcctggttcaaaacccaaagatcttgcatattcagtcaatccaatgggt
caaaattttggctctcaatctagccaacttggacaagtggacagtagcatgaatttcgag
ggtctttcaactcctcgtctagatgttaacggtctgatctcattagagcgtttaaatgtt
ggtgaaggctatgcacatgacaaagaacttccttccgcattggaacttaatcaccactca
accgaagctgtaaagatcaattccatggcagacactgggcccagcattcctcaaattctt
catatgatatgcaatgctgatgacggtagctctgtttcaagtaaacagactgcacttcaa
cagttatttgaagcttctacaacaaatgaccagtctgtttggaccaagtacttcaatcag
attttgacagttgtgcttgaggtgctggatgattccgattcctcagtcagagagctcact
ctttcgttgatagtggaaatgctcaaaaaccagaaagatgccctggagaattcagttgag
attgtaattgagaagctgcttcatgttacaaaagatatcgttcctaaggtttcaaatgaa
gcagagcactgcctgaccattgttttatctcagtctgatccattcagatgtttaagtgtt
attgtccccctactggttaccgatgatgagaaaacgcttgtcacttgcattaattgctta
acaaagcttgtgggcaggctctctcaggaggaactgatggctcagttaccctcgtttcta
ccttctctttttgaagcttttggaaaccagagtgcagatgttcgcaagactgttgttttc
tgtctcgtggatatttatatcatgcttgggaaagcattcttgccatatttgcaaggcctt
aacagcacacagttgaagctggtcacaatttatgcgaatcgaatctcacaagccaggaca
ggcaaagcaattgatatcgttcatgattag
DBGET
integrated database retrieval system
