Medicago truncatula (barrel medic): 11440579
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Entry
11440579 CDS
T01716
Name
(RefSeq) polypyrimidine tract-binding protein homolog 3
KO
K14948
polypyrimidine tract-binding protein 2
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mtr03041
]
11440579
Spliceosome [BR:
mtr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
11440579
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_ACIN1
RRM_10
RRM_PARP14_3
RBD_AKAP-17A
UNC45-central
Motif
Other DBs
NCBI-GeneID:
11440579
NCBI-ProteinID:
XP_024641942
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All DBs
Position
6:13736213..13746077
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AA seq
443 aa
AA seq
DB search
MAEQSKVIHVRNVGHEISENDLLQLFQPFGVVTKLVMLRAKNQALVQMQDVASADSAIQF
YINSQPSIRGRNVYVQFSSHRELTTMDQNQGREDEPNRILLVTVHQVLYPMTVDVLQQVF
SPHGFVEKIVTFQKSAGFQALIQYETRQSAVTARGALQGRNVYDGCCQLDIQFSNLDELQ
VNYNNDRSRDFTNPNLPTDQKGRPSQAGYGDAGNYGGIQGSGPRQAGFSQMGNAQAIEAA
FGGDLPPGITGTNERCTILVTNLNPDRIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQM
GDGFQAELAVHFLKGAMLFGKHLDVNFSKHPIITQGPDTHEYMNSNLNRFNRNAAKNYRY
CCSPTRIIHMSSLPQEIIEDEIASLLQEHGIIVNCKVFEMNGKKQALVQFETEEEATEAL
VCKHASSLSGFVVRISFSQLQNI
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggctgaacaatccaaggtcattcatgttcgaaatgtcgggcacgagatatctgaaaac
gatttgcttcagttatttcagccttttggagtcgtaacaaagcttgtgatgttgcgtgct
aaaaatcaggcacttgtacaaatgcaagatgttgcttctgctgatagtgctatacagttc
tatataaattctcaaccaagcataagggggagaaatgtttatgtccagttttcctctcat
cgagaactgacgacaatggatcaaaatcaaggacgagaagatgagccaaatcgaattctc
ttagttacggttcatcaagtgctgtatcctatgactgtggatgttctacagcaagtattt
tctcctcatggatttgtggaaaagattgtgacatttcagaagtcagctgggtttcaagct
ctcatccagtacgagactcgtcagagtgctgtgactgccagaggtgctctgcagggacgc
aatgtttatgatggttgctgtcagctggacattcagttctcaaaccttgatgaactacaa
gtgaactacaataatgaccggtcaagggactttaccaacccaaatctgcctactgatcag
aaaggccgaccttcacaggctggatacggtgatgcaggaaattatgggggaattcaaggt
tctggacccagacaagctggattttcacagatgggaaatgctcaagcaattgaagctgcc
ttcgggggagatttgcctcctggaataactggaacaaatgaaaggtgtaccattcttgtc
acaaatctcaatcctgacagaattgacgaggacaaattgttcaacttgttctctatttat
gggaacattgtcagaatcaaacttctccgaaataaaccagatcatgcacttgtccagatg
ggggatggttttcaagctgaattggcagttcactttctgaagggggccatgttgttcgga
aagcatttggatgtgaacttctcaaagcatccaattataacccaaggtcctgatacacat
gaatacatgaactccaatctcaatcgattcaaccgaaatgctgctaaaaactaccggtat
tgctgctcgccaacaaggattatccacatgtcctccctcccacaagaaattattgaagac
gagattgcaagtcttctgcaggagcatggaatcattgtcaactgcaaagtctttgagatg
aatgggaaaaagcaggctctcgttcagtttgagaccgaagaggaggcaactgaagccctt
gtttgcaagcatgcaagttcactttccggcttcgtggtccgtatctccttttcgcagttg
caaaatatatga
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