Medicago truncatula (barrel medic): 11440736
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Entry
11440736 CDS
T01716
Name
(RefSeq) oligouridylate-binding protein 1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtr03019
]
11440736
03041 Spliceosome [BR:
mtr03041
]
11440736
Messenger RNA biogenesis [BR:
mtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
11440736
Spliceosome [BR:
mtr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
11440736
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_5
Motif
Other DBs
NCBI-GeneID:
11440736
NCBI-ProteinID:
XP_003609975
UniProt:
G7JS74
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All DBs
Position
4:complement(59948481..59953230)
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AA seq
404 aa
AA seq
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MLPQKFRQNPMIEQHSLYQHPALITPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVSEP
LLQELFSSAGALEGCKLIRKEKSSYGFVDYFDRSSAAIAIVTLNGRNIFGQSIKVNWAYT
RGQREDTSGHFHIFVGDLSPEVTDATLYACFSAYSSCSDARVMWDQKTGRSRGFGFVSFR
NQQEAQSAINDLTGKWLGSRQIRCNWATKGANMNGENQSSESKSVVELTSGTSEEAQEMT
SDDSPEKNPQYTTVYVGNLAPEVTSVDLHHHFHALGVGTIEDVRVQRDKGFGFVRYSTHG
EAALAIQMGNTRFLFGKPIKCSWGSKPTPPGTASTPLPPPASTHVPVPGFSPAGLALYER
QLALSKMNEAHAVKRAAMGMGALGAGYGAGFPNVATTQHLMYYQ
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgttgccacagaagtttaggcagaatccaatgattgagcaacactctctctaccaacac
cctgctcttattactccacagatagagcctatcttgagtggaaatctgcctcctggcttt
gattcgagtacttgccgcagtgtttatgtcggcaacattcatcctcaggtttcagagccc
ctgcttcaagagctgttttcaagtgctggtgcccttgaagggtgcaagcttattcgaaaa
gaaaagtcatcatatggcttcgtggactactttgatcgcagttcagctgcaattgctatt
gtgactctcaatgggaggaatatttttgggcagtctatcaaagttaactgggcttatact
cgtggtcagagagaagacacatcaggacactttcatatttttgttggcgaccttagtccc
gaggttacagatgcaactctgtatgcttgcttctccgcatattctagctgctcagatgca
agggtaatgtgggaccagaagacaggccgatctagggggtttggatttgtttcttttcga
aatcagcaggaagcccaaagtgccataaacgatttaactggtaaatggcttggaagtaga
cagatccgttgtaattgggccacaaaaggagctaatatgaatggtgaaaatcagagttca
gagtccaaaagtgttgtggagttaactagtggaacatctgaagaagcgcaggaaatgacc
agtgatgacagtcctgagaagaatcctcaatataccactgtttatgttggcaatcttgct
cccgaggttacttctgttgatctccatcatcattttcatgcccttggtgttggaactatt
gaagatgttagggtgcaacgagacaaaggttttgggtttgtgagatacagtacccatggt
gaagcagctcttgctatacagatgggcaatactcggtttctgtttggcaaacctatcaag
tgttcatggggtagcaagcctactcctccaggaacagcctctactcctcttccaccacca
gcttctacgcatgtaccagtgccagggttttcacctgccggtcttgcattgtatgaacgc
cagttggctttgagcaaaatgaatgaggcacatgccgtaaagcgggcagccatgggaatg
ggtgctcttggggctgggtatggggcaggattccctaatgttgccaccacccagcaccta
atgtactaccagtaa
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