Medicago truncatula (barrel medic): 11440873
Help
Entry
11440873 CDS
T01716
Name
(RefSeq) AP-5 complex subunit zeta-1
KO
K19025
AP-5 complex subunit zeta-1
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
11440873
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mtr03400
]
11440873
DNA repair and recombination proteins [BR:
mtr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
11440873
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPG48
TPR_AP5Z1_C
Vps35
Motif
Other DBs
NCBI-GeneID:
11440873
NCBI-ProteinID:
XP_003607673
UniProt:
G7JDX5
LinkDB
All DBs
Position
4:39296265..39306971
Genome browser
AA seq
568 aa
AA seq
DB search
MSERDTGWDFHLRTLSISARDSNTANDPASDPSLLHSVKKLHELCKTENNEDLVARVYPQ
INKIFQRAVASLSLSQTSNGLLLLAILQFYLDFGEVVLHDADPSLRTFFRSCLSREFADP
VVAEAMIEFLIINKKRILTSFPNLMPQFFPLLLKLIAWNGERLEKQILKAFPGLMSPGSF
IPLFPSLLDLPILVVALEKVEKSSGPLIGSSIASIQKNTAPKMLLALMDEAYTGSTIEDG
GGDFESEDSSAIDVTDPLFLEILKDENDGIAERPWSSPVMTTILQTAASNPYSDRLKAVL
HLTPRLLDVYFSIALRDVNDSLICALLPLLMSRFATIFPDKVFSYEVHKRLLEFILSTFQ
RYPNFIALLKKPIMARLGEAYDSPDKTELALQLCWAIGEHGGGGGSHKDEARELFESLEL
LLYENLSSSRLGMAQEVSLSSDKDTYRRSSQSRLMCFVVTAIAKLATHHRELLPRARVSL
GKVARSRISDMRVWRRACDFLGLMKDPAICSSILGPSRSAQGTTQKIGSINWNEGATKMT
AHIPFYILGEQEGPPFHDFSFSDILSRR
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagcgtgacactggttgggattttcacctccgaacgctatctatcagtgccaga
gattccaacaccgctaacgatcccgcttccgatccttctcttcttcattccgtgaagaag
cttcatgaactatgcaaaaccgaaaacaacgaggatttagtagctagggtttatccgcag
attaacaagatttttcagcgtgctgttgcttcactttctctatctcaaacctccaatggt
cttcttttacttgcaattcttcagttttacctcgactttggggaggttgttcttcatgat
gctgatcctagtcttaggaccttttttcgttcgtgcttgagcagggagtttgctgatcct
gtcgtcgcagaagcaatgattgaatttctcattatcaacaagaagagaattttaacttcc
ttccctaacttaatgcctcagttttttccattgttgttaaagctgatagcttggaatggt
gaaagactagagaaacaaattttaaaagcctttccgggattgatgtcacctgggtcattt
attccattgtttccgtctttactagacttgcctattttggtagtggcattggagaaggtg
gaaaaaagctctggaccattaattggaagcagcattgcttcaattcagaaaaatacggct
cctaagatgctacttgcccttatggatgaagcatatactggttcgacgatagaagatggt
ggaggagattttgaatctgaagatagcagtgcaattgatgtgactgatcctttgttcctt
gagatcttaaaggatgaaaatgatggtatcgctgaacggccctggtcttcaccagtgatg
accacaatattacagactgcagcgagtaatccttactctgataggctgaaagcagtactc
cacctgacgcctcgtcttcttgatgtctacttttccatagcattgcgtgatgtaaatgat
tctttgatctgtgcgttgcttcccctgcttatgtcaagatttgcaacaatatttccagac
aaagtattctcttatgaggttcataagcggcttttggagttcatactctccacatttcag
cgctacccaaacttcattgccctcttaaagaaacctataatggccagacttggagaagct
tatgacagcccagacaagacagaattggcattgcaattatgttgggccattggagagcat
ggtggtggtggtggctctcacaaagatgaagcccgtgaactttttgagagtttagaactt
cttctgtatgaaaacctttcctcaagtcgcctgggcatggcacaggaggtatcccttagt
tctgataaggatacctacagaaggtcatcacagtccaggcttatgtgttttgttgtgacg
gccattgcaaagcttgctacacatcaccgtgaattactaccaagagcacgtgtatctttg
ggcaaggttgctcggtctcgaatttctgacatgagagtttggaggcgtgcatgtgatttc
ctgggtttgatgaaagaccctgctatatgttcatccatattagggccttcacgatctgcg
caaggtaccacacagaaaattgggagcataaactggaatgaaggtgcaaccaagatgacc
gcgcatattccgttttacattctaggtgaacaagaaggaccaccttttcatgatttctct
ttctcagatatcctttcaagaagatga
DBGET
integrated database retrieval system
