Medicago truncatula (barrel medic): 11441151
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Entry
11441151 CDS
T01716
Name
(RefSeq) RNA-binding KH domain-containing protein PEPPER
KO
K21444
poly(rC)-binding protein 3/4
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtr03019
]
11441151
Messenger RNA biogenesis [BR:
mtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
11441151
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
MOEP19
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
11441151
NCBI-ProteinID:
XP_003595075
UniProt:
G7IG88
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All DBs
Position
2:16639658..16646804
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AA seq
470 aa
AA seq
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MATTEQPQNGTATLPPENPSADAQQLTIDTEATTNESTQEIETVTETGTDTAATAVTPPE
QRWPGWPGDCVFRLIVPVGKVGGIIGRKGDLIKKLCDETKARVRVLDADLGIPDRIILIS
GKEELEAAISPAMDAVIRIFKRVSGLSETDSENKGPAGVTLCSIRLLVASTQAISLIGKQ
GTIIRSIQESSGASVRVLSGDEVQYFATAEERIVDLQGEALMVLKALEAVIGHLRKFLVD
HSILPVYEKTYNASLPQQDRQAETWSDKPLLHTTSQTSMFSDIPFPTKRDSVFADRESHL
DSLLSSSTMSLYGQDSSLSGVRSSSLSRVGAPIVTTVIQTMQIPLSYAEDIIGIQGTNID
YIRRTSGAILTVQESRVPDEIVVEIKGTTSQVQTAQQLIQEVISSHREPVTNSYGRLDAG
RMDVGLRSLYSQSSYSQLGNTSRIPPSSLSSQPYTGYGASGLGDYSTFRL
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggccaccaccgaacaaccccaaaacggcaccgccacactcccaccggaaaatccctcc
gccgacgcacaacaactcaccatcgacaccgaagcaaccaccaacgaatccactcaggaa
atcgagacggtaaccgaaaccggaacagacaccgcggccaccgccgttactcctccggag
cagagatggccgggttggcctggagactgcgtgttccgtttgatagttcctgttgggaaa
gtcggtggaatcattggtcgtaaaggagacctcatcaagaagctttgtgatgaaacgaaa
gctcgtgttcgtgttcttgatgccgatcttggtattcctgatcgaattatacttatatca
gggaaggaagaacttgaagcagctatttcccctgcaatggatgctgttataaggatattc
aaacgcgtctctggattgtctgagactgacagtgagaataaaggacctgctggggttaca
ctttgctccatccgattactggtggcatcaacacaggctatcagtttgatcggaaagcaa
ggaacaataatcagatccatacaagagagttctggtgcttctgttagagtactgtcagga
gatgaagtgcaatattttgctactgcggaagagaggattgtagacctgcagggagaagcc
ttgatggttcttaaagctctggaagccgtgattggccatctgaggaagtttttggttgat
cacagcattcttcccgtatatgagaaaacttacaatgcatctctcccacaacaagaccgt
caagcagagacctggtctgacaagccattgctgcataccacttcacagactagcatgttt
tctgatattccttttccaacaaaaagggattctgtctttgctgaccgtgaaagtcatttg
gactcattgctctcatcctccactatgtctctctatgggcaagattcttctctttctggt
gttcgttcttcatctcttagtcgtgttggtgctcctattgttactacagtgatacaaacc
atgcaaataccgctatcctatgcggaggacatcattggcattcaagggactaatatagat
tatattcgccgcactagtggagccatattgactgtgcaggagagcagggtgcctgatgaa
atcgttgtggaaataaaaggaaccacatcccaggttcaaacagcacagcaactgatacag
gaagttataagcagtcacagagaacctgtcaccaacagctatggaaggttggatgcagga
agaatggatgtgggtctaaggtctttatattctcagtcttcatactctcagttgggcaat
acatcacgtatcccgccttcttcattgtcatcacaaccatacacaggttatggagcatct
ggtttaggagactatagtactttcaggctttag
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