Medicago truncatula (barrel medic): 11441665
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Entry
11441665 CDS
T01716
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase HRD1A
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr04120
Ubiquitin mediated proteolysis
mtr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
11441665
04120 Ubiquitin mediated proteolysis
11441665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mtr04121
]
11441665
Enzymes [BR:
mtr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
11441665
Ubiquitin system [BR:
mtr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
11441665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
zf-ANAPC11
zf-RING_16
zf-RING_11
zf-RING_5
zf-HC5HC2H
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
11441665
NCBI-ProteinID:
XP_003607418
UniProt:
G7JSQ8
LinkDB
All DBs
Position
4:37754776..37761135
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AA seq
522 aa
AA seq
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MMRLQTYAGLSLIATLAITYHAFNSRSQFYPAMVYLATSKISLVLLLNMALVIMCVLWQL
TKKVFLGSLREAEVERLNEQAWREVMEILFAITIFRQDFSITFLAMVTALLLIKALHWLA
QKRVEYIETTPSVSVLSQVRIVSFLGFLLLLDGAFLYSSVKHLLATKQASVSIFFSFEYM
ILATTTVSIFVKYIFYVSDMLMEGQWEKKPVFTFYLELVRDLLHLSMYMCFFLAIFINYG
VPLHLIRELYETFRNFKVRISDYLRYRKITSNMNDRFPDATPEELNSNDLTCIICREEMT
TAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPSENGPTATGGQQRPQSDANRQGEGT
GSSAQTEVGDGVARDNLSRHQARLQAAAAAASIYEKSYVYPSPTFACYPPIHRSVVQSSN
NAELDGEQVSSEQAQKQFVIPGGPMNASSSPVQSFYVPPSQTHAAHMTYGEGSQLGAQTK
LQNEKTNVDKSVGEDTSSVSDSRGKHMAASSSVSVSGHDESP
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgatgcggttgcagacgtatgcaggtcttagtttaattgccactttggctattacatat
catgcatttaacagcagaagccagttttatccggcaatggtttatttagcaacttccaag
atcagtttagtgcttcttctcaacatggctctagtcatcatgtgtgttttgtggcagtta
actaaaaaggtgtttcttggttctcttcgggaggccgaggttgagaggcttaatgagcaa
gcatggagggaggttatggaaatcctctttgcaattactatctttagacaggatttctct
attacattccttgccatggttacggcactcttgttaatcaaggccttgcattggttggct
cagaagagagtagagtacatagagactacaccttccgtgtctgtgttgtctcaagttcga
atcgtatcttttttggggttccttcttcttcttgatggagcgtttttgtacagttcagtg
aagcatttacttgcaaccaagcaggcttcggtttcgatcttcttttcttttgagtacatg
atactagcaacaacaacagtatccatttttgtaaaatatattttctatgtcagtgacatg
cttatggaggggcaatgggaaaagaaaccggtcttcacgttttacttggaacttgttagg
gacttgcttcacttgtctatgtatatgtgcttctttctggcaatcttcataaactatggt
gttcctttgcacttaataagggagctatacgagacatttaggaacttcaaagttcgtatt
tcagattatctacgttatcgtaagatcacttctaacatgaatgatcggtttccagatgca
acccctgaagagcttaattcaaatgacttaacctgtatcatctgtcgtgaagagatgact
actgcaaagaaacttatatgcggtcatctttttcatgttcattgcctccgatcatggcta
gagcggcagcatacttgccctacctgcagagcactggttgtcccatcagaaaatggacca
actgctactgggggacaacaaagaccacagtcagatgctaatcgacaaggggaaggcact
ggaagctcagctcaaactgaggttggcgatggggtggctcgtgataatttgagtcggcat
caagcaagacttcaagctgcagcagctgcagcttcaatatacgagaagtcttatgtttac
ccttctccaacttttgcatgttatcccccgattcatagatcagtggttcaatcatctaat
aatgctgagcttgatggagaacaagtttccagtgagcaagcacaaaagcagtttgtgatc
cccggtggaccaatgaatgcgtcctcttctccagtgcaaagcttctacgttccaccatct
caaacacatgcagcccacatgacttatggagagggatcccagctgggagctcaaacaaaa
ctccagaacgagaaaacaaatgttgacaaaagtgtaggtgaggacacgtcgtcagtatca
gatagcagaggcaaacacatggctgcctcttcatctgtatctgtatcaggtcatgatgag
agcccttga
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