Medicago truncatula (barrel medic): 11441869
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Entry
11441869 CDS
T01716
Name
(RefSeq) SNF2 domain-containing protein CLASSY 1
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
11441869
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mtr03400
]
11441869
DNA repair and recombination proteins [BR:
mtr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
11441869
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
SAWADEE
Motif
Other DBs
NCBI-GeneID:
11441869
NCBI-ProteinID:
XP_024626558
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All DBs
Position
7:complement(9262546..9266919)
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AA seq
1197 aa
AA seq
DB search
MEMREKSSDTMLWEANNEKNLISHRSFEAIRNDSWQPVELIKIDFGKTTLHFMDTQQMQT
PLSSDIRIRSRKATSFDCSSFLRRGMDISMLQISDQFRPIPTSIDARINSIQRQPHESDQ
CSCQFYVNFYEDQGSLGRNIKTLNKEVYATGIDRIFILQRLQHNSCEGLIKNSDSSEVVK
PYRWDSSEDCSSLSESRLILGRFLSDLSWFVTTSFLKKVSFSIRSVQNKIFYHVMGNDAD
IINPSLLNVVNFKSEKGSIVPVVSLFDMFCDYDGEEDEALPMLSNQIEGLRRSKRRNVQP
KRYIGSSVEKLEVGTFRMRPYKIGCYLIEDENSSDLEVDDNVTLGHYYSFCKEKPTKRRL
HGSDDMDFETKWEGIRFKKGAQTKRNHSICLTNRSHVQEGGRTLNVDAKKEIIDTYMKNL
DSLRAEEEPTIDEETNKLEEEKVSKSDDGEENPDDLSAIWEEMDTAMAASCLLDGTEGSN
AEVLADTEEICEHDYTFNEEIGIFCLSCGSVKTEIRDISEPVVERQKWRKEEKQYSEEDN
DEQKSEAKVDEDDNKDMFSTNATDPDEPISAEKDTVWESIPELKEKMHAHQKKAFKFLWQ
NIAGSMEPSLMQERSETNGGCVISHAPGAGKTFLVISFLVSYLKLFPGKRPLVLAPKSTL
YTWCKEFKKWKVPVPVYLIQGRQTQRDSTAPKPTVLPGVPRPSGDVKHVLDCLGKIKKWH
SHPSVLVMGYTSFLALMRQDTKFAHRKYMAKTLRESPGILILDEGHNPRSTKSRLRKCLM
ELPTELRILLSGTLFQNNFGEYFNTLCLARPKFVHEVLRELDSKYLRRGNREKKAQHLLE
ARARKFFLDNIARKINSDNDEEKMQGLHVLRKITSSFIDVYESGNSSDTLPGLQIYTLLM
NTYDEQLEILQKLQKKMAECTGYPLEVELLITLGSIHPWLIKTATACAEKFFAEDELKRL
DRIKFDLRKGSKIRFVLSLISRVVKNEKVLIFCHYLAPVRFFIELFEKYFQWQNGKEVLI
LTGDLDLFERGKVIDKFEDPRSGSKILLASINACAEGISLTAASRVIFLDSEWNPSKTKQ
AIARAFRPGQQKMVYVYQLLTTGSMEEDKFRKTTWKEWVSSMIFSEEFVEDPSKWQAEKI
EDEILREMVEEDKSKAIHMIMKNEKDSVRNMPRHTEGQQGLLEGSYLIMQEPQSDGH
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atggaaatgagagaaaaaagctctgataccatgttatgggaagcaaataatgaaaaaaat
ctcatttctcatagatcatttgaagcaataaggaatgactcatggcaacctgtggagctt
ataaaaattgattttggaaaaacaaccttacatttcatggatactcaacaaatgcaaacc
cctttgtcatctgatattcgcataagatcaagaaaagctacttcatttgattgctctagt
tttttacgacgtggaatggacatatctatgctccaaatttcagatcaatttagacctatt
ccaacgtcaatcgatgcaagaataaattcaatccagagacaacctcatgagtctgatcaa
tgctcgtgtcagttttatgtaaatttctacgaggatcaaggttcacttggtagaaatata
aaaacactcaataaggaggtttatgcaactggaatagatcgaattttcatcctccaaagg
cttcaacataatagttgtgaaggcttaataaaaaatagtgatagttctgaagtggttaag
ccttataggtgggattcatctgaagattgctcctcattatcagagtctagactaatcttg
gggagatttttatctgatctttcgtggttcgttacaacatcctttttaaagaaggtttca
ttcagtatcagatctgttcaaaacaagattttttatcatgttatgggaaacgatgctgat
attattaatccatctcttctaaatgttgtgaacttcaaatcggaaaagggatcaatagta
cctgtggtttctctattcgatatgttttgtgattatgacggagaagaagatgaagcgctg
ccaatgctatcaaatcaaattgaaggcctacgacgttcaaaacgtaggaatgtccaaccc
aaacgttacataggttcttctgttgagaagttggaagttggtacttttcgaatgaggcca
tacaagataggatgttatttgatagaggatgaaaattcttcagatttagaagttgatgat
aatgttactttgggacattattatagtttctgcaaagagaagcctacgaagaggcgactt
catggttcagacgatatggattttgaaaccaaatgggaaggaattcgtttcaaaaaagga
gctcaaacaaaaagaaaccattcaatttgtttgacaaacagaagtcatgttcaagaaggt
ggcagaacgttaaatgttgatgcaaagaaggaaataattgacacttacatgaagaatttg
gatagtcttcgggctgaagaagagccaactattgacgaagaaacaaacaagttggaggaa
gaaaaagtgtcgaaaagcgatgatggggaagaaaatcctgatgacttgtctgccatttgg
gaagaaatggatactgctatggcagcaagttgtcttcttgatggaactgagggttcaaat
gcagaggttttagcagacaccgaggaaatttgtgaacatgactatacgttcaatgaagaa
atcggaatattctgtcttagctgcggctctgtgaaaaccgagatacgagacatttctgaa
ccagttgtggaaagacaaaaatggcgcaaagaggagaaacaatacagtgaagaagataat
gatgaacaaaaatcagaggcaaaagttgatgaagatgataataaagatatgttctcaact
aatgctactgatcctgatgaaccaatatctgcagaaaaagacactgtttgggaatcgatt
ccagaactcaaagaaaagatgcatgcgcaccagaaaaaggcttttaaatttctttggcaa
aacattgctggctccatggaaccatccctcatgcaagaaagatccgaaacaaatggtgga
tgtgtcatatcacatgctcctggagctggaaaaacctttctcgtcatttcttttcttgta
agttacttgaagctctttccagggaaaagaccattagtccttgcaccaaaatccacactc
tacacatggtgcaaagagttcaaaaaatggaaggttcctgtgcccgtgtatcttatccaa
ggccgtcaaacccagagagattcaacggctccaaaacctacggttcttcccggagttcca
agaccttctggtgatgtaaaacatgttttggattgtcttggaaaaataaaaaagtggcat
tcacacccaagtgttcttgtcatgggctacacttcatttttagccttaatgagacaagat
acaaaatttgcacacagaaagtacatggcgaaaactttgcgagaaagccctggaatcttg
atacttgatgaaggtcacaatcctagaagcacaaaatcaaggttgaggaaatgcttaatg
gaacttccaacagaattgaggatattactttctggcactttgtttcagaacaatttcggt
gaatatttcaatacactgtgtttagcaagaccaaaatttgttcacgaagtgctacgagag
ttagattctaaatacttaaggagaggtaacagagagaagaaagcgcagcatttgcttgag
gcgcgggcgaggaaattcttcttggacaacattgctaggaaaattaactcagataacgat
gaagaaaaaatgcagggtctacatgtgctgcgaaagatcacaagcagtttcatcgacgtt
tatgaaagtggaaattcctctgatacacttcctggtttacaaatatatacactgctcatg
aatacatacgatgaacagcttgagattttacagaaactgcagaagaaaatggctgagtgt
actggttaccctcttgaggtagagcttttgataacacttggatcgatacatccatggttg
atcaaaacagcaacagcatgtgcagagaagttttttgctgaagatgaattgaagaggcta
gacagaatcaaatttgatttaagaaaaggttccaaaataagatttgttctgagcctaatc
tcacgtgtagtgaaaaatgaaaaggttcttatcttttgtcactaccttgcacctgtgaga
tttttcatagagttgtttgagaaatactttcaatggcaaaatggaaaagaggttctgata
cttactggtgatctagatttgtttgaaagaggaaaagtgattgataagtttgaagatcct
cgcagcggttcgaagatacttctagcttcaatcaatgcttgtgctgaaggtattagctta
acagcagcttctagagtgatttttttggattctgaatggaatccttcaaaaacaaagcaa
gctattgcacgcgcttttcgtcctggtcagcagaaaatggtttacgtgtatcagttatta
acgactgggtcaatggaggaagataagtttagaaaaactacctggaaagagtgggtttct
agcatgatttttagtgaggagtttgtggaagatccatctaaatggcaagcagaaaagatt
gaagatgaaatacttagggagatggttgaagaggataagtctaaagctattcatatgatt
atgaagaatgaaaaggattctgtaaggaatatgccacgtcatacagaaggacagcaaggc
cttctagaaggatcatatttgattatgcaagagccacaatctgatggacactag
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