KEGG   Medicago truncatula (barrel medic): 11442475
Entry
11442475          CDS       T01716                                 
Name
(RefSeq) extensin isoform X1
  KO
K13095  splicing factor 1
Organism
mtr  Medicago truncatula (barrel medic)
Pathway
mtr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    11442475
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mtr03041]
    11442475
Spliceosome [BR:mtr03041]
 Complex A
  Other components
   Complex A specific factors
    11442475
SSDB
Motif
Pfam: KH-I_KHDC4-BBP KH_1 SF1-HH
Other DBs
NCBI-GeneID: 11442475
NCBI-ProteinID: XP_003601633
UniProt: G7JA56
LinkDB
Position
3:complement(41247964..41253265)
AA seq 804 aa
MTAKFDLTSASEPHKMSGATSTTPSSNQKLSKFGAKSGFVIPKNKLLGSLVPIIRGAKKD
GVTGVVNEESSKQIERKSRWGPDPTQDAFVRKAKVLALQIRVDQISKMLESENPEIVDTQ
NSPLEDENPGASKAGSQINSKKSEMLELEKREAIGEILKLDPSYKPPPGFKPLLKEDNVP
LPVQEYPGYKFVGLIYGTEGDNQKRLEKETGTKIKIHGTKADTGEKGEIKPGTDVQCGYQ
EMHVNISADSFDKVDAAISIIELLISSVTGNSAAGSTPSLSVSGDTTNVLNQNKDTTPSH
AISLSLENQAVFQPATNTQMQGDHFQYSGSWFSPLPSHTPLFASSGTVVPPNPQHLARAP
PFPSQTMSPSSLISAFGAQPPPVSGFHPFIPNQQFSMQAPPPTQILQHSQWPQTNPFGQV
GPPRNPSVIRAQNLSAPTNASLSFPVSLSQPTPTGQLQTSVSSTPQPLSGISPSPIANQP
LTPHGVSTGLGGGPVNVKMSVGLSNMGPMASPAVPPTRPVSLGPQPDVEYKSPQPNMLMI
PRPGSIHPHHAGMSPRPPFSLVPMPGTVHSTGNHLLGPVSFPSPRISSPLPLAQQSGIPT
SASQYSHVNPLASMPSNSGNFTFQGQRPNADYYQAVPRPNSQATTQGGTQEPPSGPRPPP
FRFAVPDQPLQSFQRTQVSNQLDPSQAYVSAAPFGGSSGSVSFPPRHPAFPYAGQPSPRS
QVPQMGMRNFIPAPQMQNLASPDVQRGMHNRQSYPAQGAWPLNQKFSNNPSLASGKPAHP
ADQIYDPFSPTSAAPPHLKGNPGK
NT seq 2415 nt   +upstreamnt  +downstreamnt
atgaccgcaaaattcgatttaacgtctgcttctgaacctcacaagatgtctggagctaca
tctacaacaccttctagtaaccaaaagctctctaaatttggtgccaaatctggatttgtt
atccccaaaaacaagttattaggatcattggtccccattatccgaggagctaaaaaagac
ggggtcactggagttgtcaatgaagaaagttcaaaacaaatcgagaggaaatcaagatgg
ggacctgatccaacacaggatgcatttgtcaggaaggctaaggttttggcattgcagatt
cgagtggaccaaatttcaaagatgttagaatcagaaaatccagagattgtagacactcag
aactcaccattggaggatgagaatccaggtgcaagcaaggctggttctcaaattaatagc
aagaagtcagaaatgctagaactcgaaaagcgggaagcaataggtgaaatactaaaatta
gatcccagttacaagcctccacctggttttaaaccattgttaaaagaagacaatgttcct
ttgcctgtccaagaatatcctgggtacaaatttgttggtcttatttatgggactgaaggt
gataatcagaagcgactggagaaggaaactggtaccaagataaaaattcatggaaccaaa
gcagacacaggagagaaaggtgaaattaaaccaggcactgatgtccagtgcggttaccaa
gagatgcatgtcaacatatcagctgatagttttgataaagtggatgcagcaatttccatc
attgaactactaatttcctctgtaacggggaattcagctgctggttccacaccttctcta
tctgtttctggggacacaactaatgttctgaatcaaaacaaagacaccactccttctcat
gcaatttctctttctctggaaaaccaggctgtgtttcaacctgcaaccaatacacaaatg
caaggagatcactttcaatactctggttcgtggttttcacccttaccatctcatacccct
ttatttgcttcttctggcactgtagttcccccaaatccacaacaccttgctagagcaccc
ccttttccatcacaaacaatgagcccttcaagtctgatttcagcttttggtgctcaacct
ccacctgtttctggattccacccgtttattcctaatcagcagttttctatgcaagcacca
ccaccgacacaaatcttacagcactcacaatggcctcaaacaaatccttttggtcaagtt
gggccaccaagaaatccttctgtaatacgtgcacagaatttgtcagcaccaacaaatgct
tcactttcatttccagtttctttaagccaaccaacaccaactggacaactccagacatca
gtctcttcaacgcctcaacctttgtctggtatatcgccgtcaccaatagctaaccagcca
ttaacccctcacggcgtatctactggactgggtggaggacccgtcaatgttaaaatgtct
gtaggtctcagcaatatggggccgatggcttcaccggcagttccccctacaagacctgtt
tctctcggtccacaaccagatgttgaatataagtcaccccagccaaatatgttgatgatt
ccacgacctggcagtattcatccacatcatgcaggaatgtcacctagaccaccattttct
ttggtaccaatgccaggaactgttcattcaactggaaaccatttattagggcctgtttca
tttccttcgccaagaatatcctctccacttccattagctcagcaatcaggaatacctact
tctgcctctcaatactcccacgtaaacccactggcctccatgccttcaaattcgggaaat
tttacctttcaaggacagaggcccaatgcagactactatcaagcggttcccagaccaaac
agtcaagctactactcagggtggtacacaagagccaccttccggtccacgcccgccacca
tttaggtttgctgtgcctgatcagcctcttcaaagctttcaaaggacacaagtctccaac
cagctggatccatctcaagcttatgtctctgccgctccttttgggggaagttcgggttct
gtctcatttccacccagacaccctgcattcccatatgctggtcaaccttcaccaagatct
caagtcccacaaatgggtatgaggaacttcattcctgcccctcaaatgcaaaatttggcc
agtcctgatgtccaaagaggtatgcacaatcgacaaagctatcctgctcagggagcatgg
cctctgaatcagaagtttagcaacaatccctccttggcgtccggtaagccagcacatcct
gcagaccaaatttatgatcctttttcacctacatctgctgcacctccacacctgaaaggt
aatcctggaaaatga

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