Medicago truncatula (barrel medic): 11442502
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Entry
11442502 CDS
T01716
Name
(RefSeq) rhamnogalacturonate lyase
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
11442502
Enzymes [BR:
mtr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
11442502
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Gene cluster
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
RhgB_N
Motif
Other DBs
NCBI-GeneID:
11442502
NCBI-ProteinID:
XP_003603710
UniProt:
G7J4M0
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Position
3:complement(55475459..55482387)
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AA seq
652 aa
AA seq
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MISRFLAHRKKNKEDGFTMSAPGVRLHIQQNYVVMDNGIVQVTLSNPDGIVTGIRYNGVD
NLLEVLNKETNRGYWDLVWSAPGSKGIFDVIKGTCFEVIVQNEDQVELSFKRTWDPSLEG
KFVPLNIDKRFILLRGSSGFYSYGIYEHLPRWPDFDISETRITFKLRKDKFQYMAMADDR
RRIMPFPEDRLPGRCQPLAYQEAVLLVNPKDPQLKGEVDDKYQYSCKNIDNRVHGWISFN
PPVGFWQITPSDEFRSGGPLKQNLTSHVGPTTLAMFLSGHYAGQDLVPKIRGGEPWKKVF
GPVYIYLNSGPTGYDPLWLWEDAKIKMMTEVQSWPYLFPASEDFLKPDQRGNVSGRLLVL
DRYISTDLISANGAYVGLAPPGDAGSWQRECKDYQFWTRADMNGFFTINNVRPGDYNLFA
WVPGFIGDYRFGDFVKITSGSYIELGELVYEPPRDGPTLWEIGIPDRSAAEFYAPDPNPQ
HINKLFINHPDRFRQYGLWDRYTELYPDADLVYTIGVSDYRKDWFYAQVPRKKADNTLEG
TTWQIKFELSGVIQGATYKLRVAIASATLAELQIRVNDPNARRPVFTTGLIGRENSIARL
GIHGLYWLYHVNIPSSLLIDGTNTIFFTQPRCTSPFQGFMYDYIRLEGPPCF
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgatttctcgatttcttgctcatagaaagaaaaataaggaggacggattcaccatgtcc
gccccaggtgtacggttacacattcaacaaaactatgtggtgatggataatggcatagtc
caagttacattatcaaatccagatggaattgtcaccggaatacgatataatggtgttgac
aatttgcttgaagttctcaataaagagactaacagagggtattgggatcttgtttggagt
gcaccaggaagcaaaggaatctttgatgtgattaaaggaacatgtttcgaagttatagtt
caaaatgaggatcaggtggagctttcattcaaaagaacgtgggatccttctcttgaggga
aagtttgtccccttaaatattgacaaaagattcattttgcttcgtggttcatcaggcttc
tactcttatggaatttatgagcacttacccagatggccagattttgatattagtgaaaca
aggatcactttcaagcttaggaaagacaagtttcagtacatggctatggcagacgatagg
cgaaggattatgccttttccggaggatcggttaccaggaagatgccaacccttggcctac
caagaagctgtcctactagtcaatcctaaggatccacaattgaaaggagaggtggatgac
aagtatcaatattcctgtaagaacatagataatcgagtccatggctggatatctttcaat
ccacccgtaggattctggcagatcacacctagcgatgagtttcgttctggtgggcctctc
aagcagaatttgacctcacatgtaggacccaccacacttgcgatgtttcttagtggtcac
tatgctggacaagatttggtacccaaaattagaggtggtgaaccatggaagaaggttttt
ggtcctgtatacatttatctcaattctggaccaactggttatgacccactctggctatgg
gaggatgcaaaaataaagatgatgacagaagttcaaagttggccatacttattccccgct
tcagaggattttttaaaaccggatcaacggggcaacgttagtgggagattacttgtctta
gacaggtacatcagcactgacttaatatcagcaaatggtgcttatgttggtctggctcca
ccaggagatgcagggtcatggcaaagagaatgcaaggactatcaattctggaccagagca
gacatgaatggattttttacgattaacaatgtacgtccaggtgactacaacctttttgcc
tgggtgcctggttttattggagactacagatttggtgattttgtgaagataacctcaggt
tcttacattgaactaggtgaacttgtatatgaacctccaagggatggccccacattgtgg
gaaataggcattcctgatagatccgccgcagaattttatgctcctgatcccaatccacag
catattaataagctttttatcaaccatccagacaggttcaggcagtatggattgtgggac
agatataccgaattatatcctgatgcagatttagtttacacaattggtgttagtgactat
aggaaggattggttttacgctcaggttcccagaaaaaaagcagataacactcttgaagga
acaacttggcaaatcaagtttgaactaagtggtgtgattcaaggagctacatataaactc
agagttgcaattgcatctgcaacattagctgaattgcagattcgagtcaatgatcccaat
gcaaggcgtcccgtatttaccactggattaataggaagggagaactcaattgcaagacta
ggaattcatggactctattggctgtaccatgtgaacataccaagttctcttcttattgat
ggcacaaatactatatttttcacacagccaagatgtaccagtcctttccagggtttcatg
tatgactatattcgtttggaaggtcctccttgtttttaa
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