Medicago truncatula (barrel medic): 11442954
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Entry
11442954 CDS
T01716
Name
(RefSeq) LEC14B homolog
KO
K11801
DDB1- and CUL4-associated factor 11
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mtr04121
]
11442954
Ubiquitin system [BR:
mtr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
11442954
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_SCAP
Cytochrom_D1
WDR54
PQQ_3
PQQ
Motif
Other DBs
NCBI-GeneID:
11442954
NCBI-ProteinID:
XP_024633075
LinkDB
All DBs
Position
2:7005327..7016180
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AA seq
514 aa
AA seq
DB search
MNKDTSNCMNDGSGSSNESSGSGMDGEGASYLVHEIAQITKLRSSPHENLSRVVPGMGKL
PASTVRMLVGREGNFSGRGKFSAADRCHMSSRYLPTKGPWIVDRMGSRAYVSQFSDDGSL
FIAGFQGSHIRIYDVDKDWKVKKDISARNLRWTITDTSLSPDRQYLVYASMSPIIHIVNA
GSATTESVANVTEVHDGLNFSSDNDNDEFGIFSIKFSTDGRELVSGTSESSICVYDLGAD
KLSLRIPAHLSDVNTVCFADESGHLIYSGSDDSFCKVWDRRCFVAKGQPAGILMGHLEGI
TFINSRGDGRYLISNGKDQTTKLWDIRKMSSNAMNLGLGDDEWDYRWMDYPKYARNLRHP
QDQSLATYQGHSVLRTLVRCYFSPSYSTGQKYIYTGSSDGSVYIYDLVSGEQVAKLDHHE
APLRDCSWHPFYPMLISSAWDGDIVRWEFPGNGQPPAPPPNRRSTGVRIRAEREMLLEFR
SMLRLRTMVIYPAMIIECMCFNENKIYFNNKFYT
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagatacaagtaactgtatgaatgatggtagtggtagcagtaatgaatctagt
ggaagtggaatggatggagaaggagcaagttatcttgttcatgaaattgcacagatcaca
aaacttaggtcaagtccacatgagaatttgagtcgggttgttcctggtatggggaaatta
cctgcatcaactgtaagaatgttggtaggcagagaaggtaatttttctggaagagggaaa
ttttcagcagctgatcggtgtcatatgtcgagccgctatttgcctaccaaaggtccttgg
attgtcgatcggatgggaagtcgtgcttatgtttcgcagttttcagatgatggttctctt
tttatagctggatttcagggaagccacatcagaatctatgatgttgacaaggactggaaa
gttaagaaagacatctctgctagaaacttacggtggacaattactgatacatctctctca
cctgatcgacaatatcttgtttatgctagcatgtcaccaattatccatattgtcaatgca
ggatcggctacaacagagtcagtagcaaatgtgacagaagttcatgatggattaaatttc
tcttctgataatgataatgatgaatttgggattttctctatcaaattttcaacggatggg
cgagagcttgtgtctggaactagtgaaagttcaatatgtgtgtatgatcttggagcagac
aaacttagcctcagaattcctgctcacctgtctgatgttaacaccgtctgctttgctgat
gaatctggtcatctcatatattctggaagtgatgatagtttctgcaaggtgtgggatagg
cgttgctttgtcgcaaaaggacaacctgctggcatcttaatggggcatttagaaggcatt
acattcattaatagtcgcggggatggccgctatttaatttctaatggaaaagaccaaact
accaagctatgggacataaggaagatgtcttctaatgccatgaatctgggccttggagat
gacgagtgggactaccggtggatggactatcctaaatatgcaagaaatttaaggcatccc
caggaccagtcattggcaacatatcaaggccactccgtgttgcgtactctagttcggtgt
tatttctcaccatcatatagcactggtcaaaaatacatttacactggatctagtgatggc
tctgtctatatatatgacctggtgagtggagaacaagttgcgaaacttgatcatcatgaa
gcacctttaagagattgcagctggcatcctttctatccaatgctgatatcttcagcttgg
gatggtgacattgttaggtgggaatttcctggaaatggtcaacctcctgctcctcctcca
aatagaagatccactggagttcgtattagagctgaacgggagatgttgctggagtttcgc
tcaatgctacgacttcgcaccatggtaatttacccagccatgattattgagtgcatgtgc
tttaatgagaataaaatctattttaataataagttttatacgtga
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