Medicago truncatula (barrel medic): 11443039
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Entry
11443039 CDS
T01716
Name
(RefSeq) probable E3 ubiquitin-protein ligase XERICO
KO
K16285
RING/U-box domain-containing protein [EC:
2.3.2.27
]
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mtr04121
]
11443039
Enzymes [BR:
mtr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
11443039
Ubiquitin system [BR:
mtr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
11443039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-RING_16
Prok-RING_1
zf_RING_Vps8
Rtf2
zinc_ribbon_16
RH_dom
PHD
PHD_NSD
Prok-RING_4
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
11443039
NCBI-ProteinID:
XP_003601512
UniProt:
B7FHG6
LinkDB
All DBs
Position
3:complement(40701901..40703549)
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AA seq
155 aa
AA seq
DB search
MGLSSLPAQSEGVLCIILVNTAMSISIFKGIIRTILHIVGIIASPSSSPSQDYIPQNIPE
SYEIHLSPSDDFVEEFRSRTPTLRFDSVCNSCKEPEHDCSVCLTQFEPESEINYCISCGH
VFHKVCLEKWLDYWNITCPLCRSPLIPEDDASCLW
NT seq
468 nt
NT seq
+upstream
nt +downstream
nt
atgggcctatcaagtcttccagcacaatctgaaggagtgttatgcatcattctagtaaac
actgccatgtcaatatccatattcaaaggcattataaggactatcctgcacattgttggt
atcattgcttcaccatcttcctctccttcccaagactacattcctcaaaacatacctgag
tcatatgaaatccatctaagtccttcagatgatttcgttgaagagttcagaagcagaaca
ccaacacttaggtttgatagtgtgtgtaatagctgcaaagaacctgaacatgattgctca
gtgtgtctcactcaatttgaacctgaatcagagataaactattgcatatcatgtggccat
gtttttcataaagtgtgtttggagaagtggttggattattggaacattacatgtccactt
tgtaggagtcctttaattcctgaagatgatgcatcttgcttatggtaa
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integrated database retrieval system
