Medicago truncatula (barrel medic): 11443137
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Entry
11443137 CDS
T01716
Name
(RefSeq) tRNA wybutosine-synthesizing protein 2/3/4
KO
K15450
tRNA wybutosine-synthesizing protein 3 [EC:
2.1.1.282
]
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mtr03016
]
11443137
Enzymes [BR:
mtr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.282 tRNAPhe 7-[(3-amino-3-carboxypropyl)-4-demethylwyosine37-N4]-methyltransferase
11443137
Transfer RNA biogenesis [BR:
mtr03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
11443137
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
TYW3
Beta-prop_FBX42
Beta-prop_ATRN-LZTR1
TRM5-TYW2_MTfase
Kelch_1
Beta-prop_TYW4
Kelch_HCF
Kelch_2
TYW2_N_2
Kelch_FKB95
Beta-prop_Calicin
NANM
DUF6242_C
MTS
Cons_hypoth95
DNA_methylase
Methyltransf_15
Methyltransf_25
PrmA
Motif
Other DBs
NCBI-GeneID:
11443137
NCBI-ProteinID:
XP_003610434
UniProt:
G7JJ74
LinkDB
All DBs
Position
4:complement(63370679..63377784)
Genome browser
AA seq
1046 aa
AA seq
DB search
MEFEKRKSATLASLNSTESDKSPKGSLDTPIIPLINTLNQNPNYFTTSSCSGRISILSQP
LSPIPSPQTKKKAKGGTWLFVSHHTANPDSIISLLFPSDSTHSTQSPISELVFRFEPLII
AIECKELSSAQSLVALAISSGFRESGITNANKRVIIAIRCSIRMEVPLGDTQKIMVTPEY
VKYLVQVANEKMEANWNRTDRFLRLLQNNGSMVNDNSNRLSQRTGVELVCDNLQFDHESQ
ITNGNAPKNESGFVGSPGFSLPIAHIEVVGEPVEKLFLWGHSACALDNADHKKVIVFGGF
GGLGRHARRNDLLLLDPYSFNLETIDTSGCACPSPRLGHTASLVGDLMFVIGGRTGPDKI
LNDVWSFDTTKNCWKLLQCGGSVFPPRHRHAAAVMGSNIYVFGGLDNDIIFSSFFILDTV
NLHWKEIPVSGDWPYARHSHAMVASDSRIFMFGGYDGGKALGDMYSFDVQMSQWKKEITA
GRNPHPRFSHSIFVYKNYLGVLGGCPVTQHCQELALLDLKLHIWKHVTLNSVGKDLFVRS
TANVVGDDLVIVGGGASCYAFGTKFSEPAKVSLLHSMHSHDDFMPVKNQKQHIIDQNGGN
KVENSQGPQLEHPPNISENESLYFNENVLHINGQSQTIPLHCVLQLEKKYAKQGKDILKK
FGWLDLGRKVYSEEGGVHICFPVHQELFAVFHERSQHSGDPIDRENKIPLSKPLTQAGYL
LNKLSCSEALTLLHEYGAVLLEDKVVETKKAAMSPLKVMSEGVTSLIEEKGLPTGLLEEL
PTRWDRIGDIVILPATSFKNSLWDSIAEELWLIVAKSLKAHRLARQGPVAATGTRDSTLE
ILVGDDGWVNHRENGIHYSFNATKCMFSWGNLSEKLRMAQMDCKDEVIVDLFAGIGYFVL
PFLVRAHAKLVYACEWNPHAIEALRHNLQSNSVAERCIVIEGDNRNTAPKGVADRVCLGL
LPSSECSWVTAVRALRKEGGILHVHGNAKDSEEYQWTDHVSKSIYEIARSEGYCWEVTIE
HVERVKWYAPHIRHVVADVRCKQIQR
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atggaattcgaaaagagaaaatcagcaacattagcttcattgaactcaacagaatcagat
aaatcaccaaaaggttcattagacacaccaataatccctctcatcaacactctcaaccaa
aaccctaattacttcaccacaagttcctgctccggtagaatttccatcctctctcaaccc
ctctctccaattccatctccccaaacaaagaaaaaagctaaaggtggtacgtggctcttc
gtttctcaccacaccgcaaatcctgactccatcatttccctcctatttccctccgattca
actcactcaactcaatcaccgatttccgaactcgttttcagatttgaacctttaattatt
gcgattgaatgcaaagaactttcttcagctcaatcactcgttgcacttgcgatttcttct
ggtttcagagaatctggtattacaaatgctaacaaacgtgttatcattgcgattcgttgt
tcgattcgcatggaagttccgttgggtgatacacagaagattatggttacccctgagtat
gtgaagtaccttgttcaagttgcaaatgaaaaaatggaagctaattggaatagaactgat
aggtttcttagattgttgcagaacaatggatcaatggttaacgataatagtaaccgtttg
tcgcagaggactggtgtagagcttgtttgtgataatcttcaatttgatcatgaatctcag
ataacaaatgggaatgcacccaaaaatgaatcagggtttgtgggttctcctggttttagt
ctgccaattgcccatattgaagttgttggtgaaccggtggaaaaacttttcctctggggt
cactctgcttgtgctttggataatgctgaccacaagaaagtcattgttttcggtggcttt
ggagggctggggagacatgctagaagaaatgacttattgctgcttgatccatattctttc
aatcttgaaacgattgacacctctgggtgtgcttgtccatctccacggttgggccataca
gcttccttggttggagatttgatgtttgtgattggaggacgaactggtcctgataaaatt
ctgaatgacgtatggagctttgatacaactaagaattgttggaagctactgcaatgtggt
ggaagtgtctttcctcccaggcatcggcatgctgcagctgtaatgggttcaaacatttat
gtatttggaggacttgataatgatattatcttttcctccttttttattcttgacacagtt
aatttacattggaaagaaattccagtttctggggactggccatatgcacgtcactctcat
gcaatggtagcatctgattctcggatttttatgtttggtggatatgatggtgggaaagca
cttggggatatgtatagctttgatgttcagatgagtcagtggaagaaagaaataacagct
ggaaggaatccacatcccaggttctcccactcaatttttgtctataagaattatctcgga
gttcttggtggttgtccagtaacacagcattgtcaagagttggcgttacttgatttgaag
cttcatatatggaaacatgttacccttaattctgtaggaaaagatttatttgtgcgtagt
acagccaatgttgttggtgacgatcttgttatagttgggggtggtgcatcatgctatgca
tttggaaccaaattcagtgagccagcaaaagtaagcttgctccattcaatgcattcacat
gatgattttatgcctgtcaaaaatcaaaaacagcatataattgaccaaaatggagggaat
aaggttgaaaattctcaaggaccccaacttgaacatccgccaaatatatctgaaaatgaa
agtttatattttaatgagaacgtgcttcacatcaatggtcaaagtcagacaattccattg
cactgtgttctgcaactagagaagaaatatgcaaaacagggtaaggatatattgaagaaa
tttggatggttagacttagggaggaaggtatattctgaagagggtggagtacatatctgt
tttcctgtccatcaggagctttttgctgtatttcatgaaaggagtcaacattcaggagat
ccaattgatcgggaaaataaaatcccactttccaaaccacttacacaagctggatacttg
ttaaataagttatcctgctctgaagccctgactcttctccatgaatatggtgccgttctg
ctggaagataaagttgttgaaacaaaaaaagctgcaatgtctcctttgaaagtaatgagt
gaaggagtaacgtctttgattgaggaaaaaggcctaccgactgggcttctagaggaattg
ccaacaaggtgggatcggattggtgatattgtcatacttccagctacttcattcaagaat
tctttgtgggactctattgcagaagagctctggctaattgttgccaaatcacttaaggcc
catcgtcttgctcgccaaggcccggttgctgcaactggtacaagagatagtacattagag
attcttgttggagatgatggttgggttaaccatcgagaaaatggaatacactattctttt
aatgctacaaaatgcatgttctcgtggggtaatctctctgagaagcttcggatggcccag
atggattgcaaagatgaggttatagtagatctgtttgcgggcatcggatactttgtgctg
ccttttcttgtcagggcccatgcaaaacttgtatatgcctgtgagtggaatccccatgcc
attgaagcactccgacataatctacaatcaaattctgttgctgagcgttgtatcgtgatt
gaaggagataatcgaaatacagctcctaagggtgtggctgatagagtctgtcttggtctc
cttccatctagtgaatgtagctgggtcaccgctgtgagggctttaaggaaagaaggtgga
atattacatgttcatgggaatgcaaaggattcagaggagtatcagtggaccgatcatgta
tcaaagtcaatatatgaaattgctagatctgaaggatattgttgggaggttactatagag
catgttgaaagagtgaaatggtatgctccacacattcgccacgttgttgcagatgtgaga
tgcaaacagatccagagataa
DBGET
integrated database retrieval system
