Medicago truncatula (barrel medic): 11443192
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Entry
11443192 CDS
T01716
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mtr03400
]
11443192
Enzymes [BR:
mtr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
11443192
DNA repair and recombination proteins [BR:
mtr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
11443192
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Motif
Other DBs
NCBI-GeneID:
11443192
NCBI-ProteinID:
XP_003629318
UniProt:
G7LC44
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Position
8:complement(34518435..34525694)
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AA seq
613 aa
AA seq
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MKIVSYNVNGLRQRITQFGSLRNLLNSFDADILCFQETKLSRQDVTADLVMVDGYESFFS
CTRTSQKGRTGYSGVITFCRVRSAFSSNEAALPLAAEEGFTGLLCSSQTSEGKLPFFMEE
DLEDFSKDELLNVDSEGRCVVTDHGHFVLFNIYGPRAGGDDTERIQFKKTFYRILQKRLE
SLLHQGRRIFVVGDLNIAPFAVDRCDAGPDFEKNEFRRWFRSMLIENGGRFSDVFRAKHP
DKMDAYTCWSQSSGAEVFNYGSRIDHILCAGSCLHKSDDLQSHSFIGCHVKECEILTQYK
RFKPESTLSSHRWKGGQSIKLEGSDHAPVCATLMGIPEVSLHSTPSLSSRYVPMVHGVQQ
SLVSLLMKRRVSESCKMANGDILTVSTCERIEEPVDKIGSSTCECDLFPNQDSEGSILKP
NELSAGSSQESVSKSGSVYEKSITQKCNESKKKARNSQSSQLSIRSFFQKSTSLDNGVKD
SCISYSNNEAEPSQPNSQLLETCTIIDHSSNPGQDEINADVCGQDLAEINNSSRKEEKSN
VASQEWQRIQKLMQNSIPLCKGHKEPCIARVVKKQGANFGRRFYTCARAEGPASNPEANC
GYFKWATSKSKNK
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgaagatagtgagttacaacgtgaacgggttgagacaacgcataactcagttcggttct
cttcggaatcttcttaattcattcgacgctgacattctttgctttcaggagacaaaactt
agtaggcaagatgttacagcggatttggttatggttgatggatacgaatctttcttttct
tgtaccagaacttcccaaaaaggccgaaccggttattctggtgttattacattttgtcgt
gtaaggtctgctttttccagtaacgaagcagcattgcctttggcagctgaggaaggattc
actggcctattgtgtagctctcaaactagtgaaggcaagttgccattctttatggaagaa
gatcttgaggatttttcaaaagatgagcttctcaatgttgatagtgaagggcgatgtgtt
gtcactgatcatggtcattttgttcttttcaatatttatgggcctcgagctggaggcgat
gacacagagaggattcagtttaaaaaaactttttacaggatactgcagaaaagattggag
tctctactgcatcaaggaaggagaatatttgttgtaggtgatcttaatattgcgccattt
gcagttgatcggtgtgatgcaggacctgattttgaaaaaaatgagtttagaagatggttc
agatcaatgttaatcgaaaatggaggtcgcttttctgatgttttccgagccaagcatcct
gataaaatggatgcatacacatgttggtcgcaaagttcaggtgctgaagtgtttaactat
gggagtagaattgaccatattctatgtgctggttcatgcttacataaatcagatgacctg
caatcccatagttttataggatgccatgttaaggaatgtgaaattctgactcagtacaaa
cggttcaaacctgaaagcacactgagttcccacaggtggaagggaggacaaagcattaaa
cttgaaggatccgatcatgctccagtttgtgcgactttaatgggaattcctgaggtctct
ctgcatagtactccctccttatcttctagatatgttcccatggttcatggcgtacagcaa
agtctagtgtcattgttgatgaaaagacgagtttctgaatcgtgcaagatggcaaacgga
gacattctaacggttagtacttgtgagagaatagaagaaccagtcgacaaaattggttcg
tcaacctgtgaatgcgatttgtttccaaaccaggattcagaaggtagcattttgaaacca
aatgaactttcggcgggttcttctcaggagtctgtttctaaatcaggaagtgtatatgaa
aaatcaataactcagaaatgcaatgaatccaagaaaaaagctagaaatagtcaatcgtcc
caactctccattagatcattttttcagaaaagcacaagtcttgacaatggtgtcaaggac
tcttgtattagttactctaataatgaggcagaaccctcacaacccaactctcaattactt
gaaacttgtacaattattgatcatagtagcaatcctggtcaagatgaaataaatgctgat
gtttgtggtcaggatttagctgaaataaataatagttctagaaaggaagaaaagagtaat
gtagcttcacaagagtggcaaagaatacaaaaattgatgcagaacagtatacctctttgc
aagggacataaggaaccttgtattgctcgagtggtaaagaaacaaggagctaattttggt
cgcagattctatacttgtgctcgtgctgagggccctgcatctaatcctgaagcaaactgt
ggctactttaaatgggctacttcaaagtctaagaataaataa
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