Medicago truncatula (barrel medic): 11443292
Help
Entry
11443292 CDS
T01716
Name
(RefSeq) E3 ubiquitin-protein ligase ATL4
KO
K10663
E3 ubiquitin-protein ligase ATL4 [EC:
2.3.2.27
]
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mtr04121
]
11443292
Enzymes [BR:
mtr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
11443292
Ubiquitin system [BR:
mtr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
11443292
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-C3HC4_2
zf-ANAPC11
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-RING_16
Orf78
DUF2797
Motif
Other DBs
NCBI-GeneID:
11443292
NCBI-ProteinID:
XP_003595366
UniProt:
G7IIR6
LinkDB
All DBs
Position
2:complement(19538582..19539776)
Genome browser
AA seq
298 aa
AA seq
DB search
MGNTNSSHNLFITVTVFAVTVTVFFILYFILRRRRFSPSSSSIFRVSPVTTTSSTSSSVV
DSLPIFTFSSIKRRSSTVVSGDCAVCLSKFEQNDLLRLLPLCCHAFHTECIDAWLSSNQT
CPLCRSSVFASESEIMKIFRSSSTSSGNNSFRLEIGNISNRREATATDNNNNNVAGETDQ
RTYSVGAFEYFVDEEAEIPVGNTNRRIFSGEKEDAVVLAVEVETPVASQASLIGEGNWLK
DYVDGLTRVMSFRGSGRFFTGSGRRNDVVAGVGDFDVEANGNGFGEEISEMFRWISGV
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacacaaattcctcacacaaccttttcataaccgtaaccgttttcgccgttacc
gtcaccgttttcttcattctctacttcatcctccgtcgtcgccgtttctctccgtcatcc
tcctccatttttagagtttctccggtcaccacgacttcgtccacttcatcttccgtcgtt
gattctctcccgattttcaccttctcatccatcaaacgccgttcctccaccgttgtctcc
ggcgactgtgccgtttgcttatcaaagttcgagcaaaacgatctcctccgtcttcttcct
ctctgctgtcacgcattccacacggaatgcattgacgcttggttatcgtcgaatcaaacc
tgtccgttatgtcgatcatccgtattcgcttcggaatcggagattatgaagattttccgt
tcatcctccacctcttccggtaacaacagctttcgtttagagataggcaacatcagcaac
cgccgtgaagcaaccgcaactgacaataacaataacaatgtcgccggagaaactgaccag
aggacttactccgtcggcgcgtttgagtatttcgtcgacgaggaagctgagattccggtt
ggaaacactaatcggagaatattttccggtgaaaaagaggatgcggtggtgcttgcggtg
gaggtggagactccggtggcttctcaggcgagtttaatcggtgaaggtaactggttgaag
gattacgttgatggtttaacaagagtgatgtcgtttcgaggttctggaagattctttact
ggaagtggtagacgaaacgacgtcgttgctggtgttggagattttgatgttgaagctaat
ggtaatggatttggggaagagattagtgagatgtttaggtggatttcaggggtttaa
DBGET
integrated database retrieval system
