Medicago truncatula (barrel medic): 11444230
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Entry
11444230 CDS
T01716
Name
(RefSeq) transcription elongation factor SPT4 homolog 2
KO
K15171
transcription elongation factor SPT4
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
11444230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mtr03021
]
11444230
03019 Messenger RNA biogenesis [BR:
mtr03019
]
11444230
Transcription machinery [BR:
mtr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
11444230
RNA polymerase I system
11444230
Messenger RNA biogenesis [BR:
mtr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
11444230
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt4
Motif
Other DBs
NCBI-GeneID:
11444230
NCBI-ProteinID:
XP_003602386
UniProt:
G7J900
LinkDB
All DBs
Position
3:45864393..45869940
Genome browser
AA seq
116 aa
AA seq
DB search
MASAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFLQMEEDQERAVECTTPNFN
GIISVMDPTRSWAARWLRIGKFVPGVYTLAVSEALPDDMQAICEDKHVPYTLPKRS
NT seq
351 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtgcacctgctcaaatccctacaagctttggacatgaattgagggcttgtctt
cgttgccgccttgtcaaaacctacgatcagtttagggagtcaggatgtgagaactgccca
tttttacagatggaagaagatcaagagcgtgctgttgaatgcaccacccccaattttaat
gggatcatttctgtaatggatccaactcgaagctgggccgcccgttggttgcgcattgga
aaatttgttcctggtgtttacactcttgctgtctcagaggctcttccagacgatatgcag
gctatttgtgaggataagcatgtgccatatacacttcccaaacgttcgtga
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