Medicago truncatula (barrel medic): 11444270
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Entry
11444270 CDS
T01716
Name
(RefSeq) rhamnogalacturonate lyase-like isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
11444270
Enzymes [BR:
mtr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
11444270
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
Motif
Other DBs
NCBI-GeneID:
11444270
NCBI-ProteinID:
XP_039685264
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All DBs
Position
8:30863961..30871231
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AA seq
690 aa
AA seq
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MMKMKVLSKKNKHVILYWWFGMIVQFCFLLCVCAEKTSLRGGINSLKSKSIVKLNTQDKH
KLVVDNGIVSVSMARPEGYILGISYNGIDNVLDSENQELDRGYFDVVWNEPGEQNLSKST
FQRIHGTNFSVIAADENMVEVSFSRLWTHSMSGKNVPINIDIRYIFRSGDSGFYSYAIFN
RPKGMPGIEVDQIRFVFKLDKDRFKYMAISDTRQRNMPAMKDRNTGQVLAYPEAVLLTNP
INPQFRGEVDDKYQYSCENKDNTVHGWIGFDSDPPVGFWMITPSNEFRNGGPIKQDLTSH
VGPIALSMFVSTHYAGKEVTMAFQEGETYKKVFGPVFVYLNTASSENDNATLWSDAVQQL
SKEVQSWPYDFPQSQDYFPPNQRGAVFGRLLVQDCSRYFEGGRYQYANNAYVGLALPGDA
GSWQRESKGYQFWTQTDAKGYFKITNVVPGHYNLFGWVSGFIGDYKYNSTITITPGGVIK
LNSLVYNPPRNGPTIWEIGIPDRLTSEFHVPEPYPTLMNKLYTEGRDNFRQYGLWERYTE
MYPTDDLIYTLGVNKNKDWFYAHVTRNTENNTYEPTTWQIIFEHQHDLKSGNYTLQLALA
SAADAYLQVRFNDRSVYPPHFATGHIGRIRGDNCIQRHGIHGLYRLFSIDVPSNLLLKGK
NIIYLTQTNADTPFQGVMYDYIRLEQPPAT
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagatgaaagtgttgagtaagaagaacaaacatgttatcttatattggtggttt
ggaatgattgtgcaattctgtttcttgttatgtgtttgtgctgagaagacatcattgaga
ggaggaatcaatagcctaaaatcaaaatcaatagtcaagctgaatacacaagacaaacac
aagttggttgttgataatggcattgtttctgtgtctatggcaagaccagagggatacatc
cttggaatatcgtataatggaattgacaatgttcttgattctgaaaaccaagaactagat
agagggtacttcgacgttgtttggaatgaacctggagagcaaaatcttagtaaaagtact
ttccagagaatccatgggacaaatttttcagttattgcagctgatgagaatatggtggag
gtttcattttcaagattatggacacattccatgagtggcaaaaatgtccccataaacata
gatataaggtacattttcagaagtggtgattctggattttattcatatgcgatattcaat
cgaccgaaaggaatgccaggaattgaggttgatcaaattagatttgttttcaaactcgat
aaagacaggttcaagtacatggcaatatctgatacaagacaaagaaacatgccagcaatg
aaagatagaaacacaggtcaagtactagcttatcctgaagcagttctattaaccaaccca
attaacccacaatttagaggagaggtggatgataaatatcaatactcttgtgagaacaaa
gataacacagttcatggatggattggttttgattctgatccaccagtgggtttctggatg
ataacaccgagtaatgagtttcgcaatggtggacccattaagcaagatcttacttctcat
gttggaccaatcgctctttcgatgtttgtgagcacacactatgctggaaaggaagtaacc
atggcatttcaagaaggagagacctataaaaaggtttttggacctgtatttgtctacctt
aacactgcttcaagtgagaatgataatgcaactctctggtcagatgcagtacaacagtta
tccaaggaagtccaaagttggccttatgattttcctcaatcacaagattactttccacct
aatcaaaggggagcagtatttggaagattactagtccaagattgttccaggtacttcgaa
ggaggaagatatcaatatgctaataatgcttatgtgggtctagctttgcctggagatgct
ggatcatggcagagagaaagcaagggctatcaattttggactcaaactgatgccaaggga
tactttaaaataactaatgttgtgccaggtcactataatctgtttggttgggtctctgga
ttcattggtgattacaaatataatagtacaatcacaatcaccccaggaggagtcatcaaa
ttaaattcacttgtatataatcctcctagaaatggaccaaccatttgggaaattggtatt
ccagatcgtttgacttcagaattccatgtaccagaaccttaccctactctcatgaacaaa
ttatacactgaaggaagagacaattttaggcaatatgggttgtgggaacgttacactgaa
atgtatccaactgatgatcttatttacactctgggtgttaacaagaataaagattggttt
tatgctcatgttacaagaaacacagaaaataatacatatgaaccaacaacatggcaaatt
atatttgaacatcaacatgacttaaagagtggaaactacacactacaacttgccttggcc
agtgctgctgatgcttacctacaggttcggttcaatgatcgaagtgtatatccaccccac
ttcgcgacagggcatataggaagaatccgaggagacaattgcatacaaagacatggaatt
catggattgtataggttgttcagtattgatgtgccaagtaatcttcttttgaaaggaaag
aacatcatatatctaacgcagaccaacgccgatactcctttccaaggagttatgtatgat
tacatccgtttagaacaaccaccagcaacttga
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