Medicago truncatula (barrel medic): 11444474
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Entry
11444474 CDS
T01716
Name
(RefSeq) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr00040
Pentose and glucuronate interconversions
mtr01100
Metabolic pathways
Module
mtr_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
11444474
Enzymes [BR:
mtr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
11444474
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-GeneID:
11444474
NCBI-ProteinID:
XP_003595746
UniProt:
G7IGR9
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All DBs
Position
4:17281520..17285274
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AA seq
444 aa
AA seq
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MYQEKTIITLLMIFLASLFICNGSYIVEPHHQANVERYYHVHDGRLIKTKHQHFGHITRT
NRDTLFSSKSQGMVSVDDFGARADGRDDWEAFKKAWNEACSKGYVLVVPKNRIYRLKPIT
FSGPCQPNTAFMLYGTIEAWSQMSAYEEDRQHWIVFDSVSNFKVDGGGTFNGNGKKWWEN
SCKYSNNNLPCNDEPRPTAVTFYDCKNLKVKNLRFKDSQQMHVVFERCFNVFVSNLIVRA
PEDSPNTDGIHVAETQNIDIINCDIGTGDDCISIVSGSKNVRAIDITCGPGHGISIGSLG
ADNSEAEVSNVVVNRAALTGTTNGVRIKTWQGGSGYARNIKFMNIKMQNVTNPVIIDQYY
CDQTEPCQERNKAVQLSQVLYQNIRGTSASEIAIKFNCSRSVPCREIYLQDVILEPEGGG
GTTATCENVRYVNRGKFYPQCSPQ
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgtatcaagaaaagacaattatcacacttctcatgatattcctagcttcattattcata
tgcaatggctcttacatagtggaaccacatcatcaagccaatgttgaacgttactaccat
gtacatgatggtagattgatcaaaacaaaacatcaacattttggtcacataactaggacc
aatagagatacacttttctcttcaaagtctcaaggaatggtaagtgttgatgactttgga
gcaagagcagatggaagagatgattgggaggcatttaagaaggcatggaatgaagcatgt
tctaaagggtatgtccttgtggtacccaaaaataggatatatcgtctcaagccaataact
ttttcaggtccatgtcaaccaaatactgcctttatgctctatggaacaattgaagcatgg
tctcaaatgtcagcatatgaagaagataggcaacactggattgtgtttgatagtgtctca
aatttcaaagttgatggtggtggcactttcaatggcaatgggaaaaaatggtgggaaaac
tcctgcaaatattccaacaataaccttccatgcaatgatgaaccaagaccaactgcggtg
acattctatgattgcaaaaatttgaaagtaaagaatctaaggttcaaagattcacaacaa
atgcatgtagtatttgagagatgcttcaatgtgtttgtttcgaatttgattgtgagagcg
ccagaggatagtcccaacaccgatggaattcatgttgccgaaacacaaaatattgacata
ataaattgtgatattgggacaggtgatgattgtatttcgatagttagtggatccaaaaat
gttcgagctatagatatcacttgcggaccaggacatgggatcagtattggaagcttagga
gctgataactcagaagctgaagtttccaatgtagtagtgaacagagcagccttaacagga
acaactaatggagtgagaataaaaacatggcagggtggttcaggatatgcaagaaacatc
aaatttatgaacataaaaatgcaaaatgtgacaaatcccgtaatcatagatcaatactac
tgtgatcaaacagagccatgccaagagcggaacaaagccgtgcaattaagccaagttttg
taccaaaacatcagaggaacgagtgcttcggaaatagcgatcaaatttaattgcagccga
agcgttccttgcagagaaatatacttgcaggatgtgattttagaaccagaaggtggtggt
ggaactactgcaacatgtgagaatgttcgatatgtaaacagaggaaagttttatcctcaa
tgctctccacaatag
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