Medicago truncatula (barrel medic): 11444771
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Entry
11444771 CDS
T01716
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
11444771
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtr03019
]
11444771
04121 Ubiquitin system [BR:
mtr04121
]
11444771
03036 Chromosome and associated proteins [BR:
mtr03036
]
11444771
03400 DNA repair and recombination proteins [BR:
mtr03400
]
11444771
Messenger RNA biogenesis [BR:
mtr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
11444771
Ubiquitin system [BR:
mtr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
11444771
Chromosome and associated proteins [BR:
mtr03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
11444771
DNA repair and recombination proteins [BR:
mtr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
11444771
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
zf-HC5HC2H
BRCT_2
zf-HC5HC2H_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_6
PTCB-BRCT
zf-RING_5
RTT107_BRCT_5
PHD_NSD
Prok-RING_4
zf-Nse
Motif
Other DBs
NCBI-GeneID:
11444771
NCBI-ProteinID:
XP_003625346
UniProt:
G7KXD0
LinkDB
All DBs
Position
7:46109258..46115560
Genome browser
AA seq
687 aa
AA seq
DB search
MENSGKSIMNNNTKLLNPWMLHFQKLALELKCPLCLNLFKKPVLLPCNHLFCSSCLADST
SIRSECALCNTKCSQKDIRHLPFVESIVTIYKSLDATFCANAFQQRSSDNTRVLEQCQTL
HNSAFSNKVDKVLQNSCMSNEVGVGKNHQSGIKMNGKAKEVEMSCKRGADNHIAEKPDSM
NLNQATQSEPDSPPFCDTKGSDNGCSDLNSEKPLSLGRSESSSFKRSSTTGKGNLKERMP
HFWSESSASENEDLTRDLKRQKNLTNEDGIVQQSTSYHNKLVDSRCDLEIKSDKDTGALV
PSNAPSDLYPSTSICSFCQSSKISEATGSMLHYASGISVTGEAAMEPNVVHVHKVCIDWA
PQVYFVGETVKNLKAEVARGAKLKCTKCGKKGAALGCYVKSCRRTYHVPCAMDISACRWD
HVDYLLLCPSHSNVKFPNEKSNLDKQATQKHPVSSHLPSQQSNQLGAVQGDGKKMVFCGS
ALSNEEKVLLINFASKVGATVSKCWTSDVTHVIAATDANGACSRTLKVLRAILNGQWILK
MDWIRACMKAMNLVEEELYEIDLDNQGCQGGPKAGRLRALANEPKLFSGLKFYFSGEYDS
SYKKYLEDLVEGGGGVVLKSKDELEVGRDANLLAVYNLDPPEGCELEDEVSILWHRLTEA
ENLTANTAGHTWILESIAACKLQPFVS
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggaaaattctggaaaatcaataatgaacaacaacactaaattattgaatccatggatg
cttcattttcaaaaactcgctctcgaactcaaatgccctctctgcttgaacttgttcaag
aaaccggttttgttaccatgcaatcatttgttctgcagttcctgtttggcggatagtact
tcgattcgttctgaatgtgctctctgtaacaccaagtgctctcaaaaagatattaggcat
ttgccttttgttgaaagtatagtgacaatttataaaagcttggatgcgaccttttgtgca
aacgcttttcagcaacgttcttctgataatacgagggttttggagcagtgccaaactctt
cacaattcagcttttagtaataaggttgataaggttctgcagaattcatgtatgtcgaat
gaagttggggttggcaagaatcaccaatctgggattaagatgaatggtaaagccaaggag
gttgaaatgtcttgcaagagaggggctgacaaccacattgcagagaagcccgattcaatg
aatttgaatcaagcgacacaatcagaaccagacagccctccattttgtgataccaaaggt
tctgacaatggttgcagtgatctaaacagcgagaagccactcagtcttgggaggtctgaa
agttcgtcatttaaaagatcaagcacaacaggaaaaggtaatttgaaagaaagaatgcct
catttctggtctgaaagttctgcctctgaaaacgaggatcttacgagagatcttaagaga
caaaagaatcttacaaatgaagatggtattgttcaacaaagcacctcatatcataacaag
cttgtggattcccgctgtgacttggaaattaaatctgacaaggacactggtgcactcgta
ccttcaaatgcaccaagtgacttgtacccaagtacaagcatttgttcgttttgtcagtcc
tctaaaatttcagaggctactgggtcaatgctgcattatgcaagtggcatttcagttacc
ggagaggctgcaatggaaccaaatgttgtgcatgtgcataaagtttgtattgactgggca
ccacaagtgtattttgttggtgaaactgttaagaatttgaaagcagaagtggcccgggga
gcaaagcttaaatgcaccaaatgcggtaaaaagggagctgctcttggttgctatgtcaag
tcatgtagaagaacttatcatgttccttgtgcaatggacatctctgcttgccgctgggat
catgtggattatctcttgttgtgtcctagtcattcaaatgtcaaatttccaaacgagaaa
tctaatcttgataaacaggcaactcagaagcatcccgtttcatctcatctgccatctcaa
cagtcaaaccaactgggagctgttcagggtgatggtaaaaaaatggttttctgtggatct
gctctatcaaatgaagaaaaggtgctattgattaattttgcaagcaaggttggtgctaca
gtgtccaagtgttggacctcagatgtcacacatgtgatcgcagcaactgatgcaaatgga
gcatgctccaggacattgaaagttttgagggcgattctaaatggacaatggatcctaaaa
atggactggataagagcatgcatgaaagcgatgaatcttgtagaagaagaactgtatgaa
attgatcttgacaaccaagggtgtcaaggtggcccaaaagctggcagacttagggcattg
gccaatgagccaaagctattcagtggcttaaagttttatttttctggtgaatatgattcg
agttataagaaatatcttgaagatttagttgaagggggaggaggtgttgttttgaaaagc
aaggatgaattggaagttggaagagatgcaaatttgttggcagtttacaatcttgatccc
ccagaaggatgtgagctggaggacgaagtttcaattctttggcatagattaaccgaagca
gagaatttaactgccaatactgctggtcacacgtggattctggagtcaattgctgcatgc
aaattgcagccttttgttagctaa
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