Medicago truncatula (barrel medic): 11444846
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Entry
11444846 CDS
T01716
Name
(RefSeq) ubiquitin domain-containing protein DSK2a
KO
K04523
ubiquilin
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
11444846
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mtr04131
]
11444846
03051 Proteasome [BR:
mtr03051
]
11444846
Membrane trafficking [BR:
mtr04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
11444846
Proteasome [BR:
mtr03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
11444846
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
UBA
UBQLN1
UBA_7
UBA_HOIP
Rad60-SLD
TBK1_ULD
Rad60-SLD_2
Motif
Other DBs
NCBI-GeneID:
11444846
NCBI-ProteinID:
XP_003629154
UniProt:
G7L9G2
LinkDB
All DBs
Position
8:complement(33708020..33713128)
Genome browser
AA seq
485 aa
AA seq
DB search
MENYENDSCTSLLPTNGAQSDGVTRPTSNDYKPNILEDKEVAACKLKGVAESVNINVRYF
NGSKFCVEAALESTVESFKQLIIGNCDIPIQNQRLIYKGNILQNNQSLQSYGLGPNHTVY
LVRCYAPTDTNDGTNNMDIDADGERDGLLGEGFSDFEPMQLCHPLHASINPHFLREFLST
PDLQCLVLNPDVMWSILTNSQELSGIVFDPSSVIRVLEDVRIPGIVNEIRRLADLELGSI
ESIPGGLNQLRYIYEDIVEENVAAGIYENQARDQSNGSETNAGSSLPNTTPLPNPWSFTG
FEGYQSNIRRSITGENEDDYLQREPVVLEPIDFSNVDSLLGGHVMANANLSTQLVQDQLQ
EFIPSHPEFGGRNAEQNGEADLSFLREEIQNPDFLSLYSQPETLQQPLSSEQDLLPHLNQ
QESIQEPNQTTGGTGSEAAEQLYATQLSQLQEMGFFDTQENIRALIATSGDVHAAIQRLS
RNSNQ
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggaaaactatgaaaatgattcatgtacatctttgttaccaactaatggtgctcagagt
gatggtgtgaccagacccacgagcaacgattataagccaaatattttagaagataaagaa
gttgctgcatgcaaattgaagggcgtcgctgaaagtgtaaacatcaatgttcgttacttc
aatggttcaaagttttgtgttgaagctgcactagaatccacagttgaatccttcaaacag
cttatcattggaaactgtgacatcccaatccaaaatcaaagactcatttacaagggaaac
atcttgcagaataatcaatccctgcaaagctatggtttggggccaaatcatactgtctat
ttggttcgttgttatgcacccaccgatacaaatgatgggaccaacaatatggacattgat
gctgatggtgagagggatggcttacttggggaaggattttcagattttgaaccaatgcag
ctctgccatccactacatgcttccattaatcctcactttttaagagaatttctaagcaca
ccggatctgcagtgcctagttttgaatcctgatgtgatgtggagtattttaaccaacagt
caagagctgtcgggcatagtttttgatcctagcagtgtgatccgggttcttgaagatgta
aggatccctgggattgtgaacgaaataaggagactagctgacctcgaactgggcagcatt
gaatctattcctgggggattaaaccagttgaggtacatttatgaagacattgtagaagaa
aatgtcgctgcaggaatctatgaaaaccaagccagggatcagtcaaatggtagtgaaaca
aatgctggttcttcgttaccaaatactactccacttcccaatccctggtcttttactgga
tttgaaggttaccagagtaacataagaagatcaatcaccggtgagaatgaggatgattat
ctacagcgcgaacctgttgtcttagaaccaattgatttttccaatgttgatagcctattg
ggtggacatgttatggcaaatgctaatttatcgacccaattagtgcaagatcaactacaa
gagtttataccttcccacccagagtttggtggtcgtaatgctgaacaaaatggtgaggct
gatttaagttttctcagagaagagattcaaaatccagatttcctttctctgtattcacaa
cctgagacattgcagcaaccattgtcttccgaacaagatcttctgcctcatcttaatcag
caggaatcaatacaggaaccgaatcagacaactggaggcactggcagtgaagcagcagag
caattgtatgccacccaactttcacagcttcaagagatgggattctttgacacacaagaa
aacataagagctcttattgccacttcaggggatgttcatgccgccattcaacgtctttcg
aggaactccaatcagtag
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integrated database retrieval system
