Medicago truncatula (barrel medic): 11445062
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Entry
11445062 CDS
T01716
Name
(RefSeq) serine/arginine-rich splicing factor RS31 isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
11445062
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mtr03041
]
11445062
Spliceosome [BR:
mtr03041
]
Common components
Common spliceosomal components
SR proteins
11445062
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_3
RNA_bind
SET_assoc
RRM_Nup35
RRM_5
Motif
Other DBs
NCBI-GeneID:
11445062
NCBI-ProteinID:
XP_003627532
UniProt:
G7LAU9
LinkDB
All DBs
Position
8:9547970..9550879
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AA seq
249 aa
AA seq
DB search
MRPVFAGNLEYDTRQSELERLFSKYGRIERVDMKSGFAFVYYEDERDAEEAIRALDNIPF
GHDKRRLSVEWARGERGRHRDGSKPNQKPTKTLFVINFDPIRTRVSDIERHFKPYGPLHH
VRIRRNFAFVQYETQEDATKALECTNMSKILDRVVSVEYALRDDSDRVDNYGGSPRRGGG
LARSPSPGYRRRPSPDYGRPRSPVYDRYTGPDRRRSPDYGRNRSPDYGRNRSPEYGRYRS
RSPVRRSRT
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgaggccggttttcgctggaaatttggagtacgatactcgtcaatcagaacttgaacgc
ttgttctcaaagtatggaagaattgaacgtgttgatatgaaatctggatttgcctttgtc
tattatgaagacgaacgtgatgctgaagaagcaattcgtgcgcttgacaatattccattt
ggtcatgacaagcgacggctatctgtggagtgggctaggggtgaacgtgggcgtcaccgt
gatggctcaaagccaaaccagaagcccactaagactctatttgtgattaactttgacccg
attcgcactagagttagtgatatagagagacactttaaaccttatgggccgcttcatcat
gttcgaattcgtcggaactttgcatttgtgcagtatgaaacacaagaagatgctactaaa
gccttagagtgtacaaatatgagtaagatactggatagggtggtgtctgtagagtatgct
ctgagggatgatagtgacagggtcgacaattatggtggcagtcccagaagaggagggggt
cttgctagatctcccagtccaggttatcgcaggcgaccaagtccagactatggccgtcca
cgtagtcctgtgtatgataggtatactggaccggacaggcggaggagtcctgattatggc
aggaacaggagtcccgattatggcaggaacaggagtcctgaatatggcagataccgcagt
cgttcaccagtgcgaaggtcgagaacttag
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