Medicago truncatula (barrel medic): 11445389
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Entry
11445389 CDS
T01716
Name
(RefSeq) pumilio homolog 6, chloroplastic isoform X1
KO
K17943
pumilio RNA-binding family
Organism
mtr
Medicago truncatula (barrel medic)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PUF
PUF_NOP9
CPL
DUF445
Mucin15
Motif
Other DBs
NCBI-GeneID:
11445389
NCBI-ProteinID:
XP_003594978
UniProt:
G7IN26
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Position
2:complement(16129103..16140228)
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AA seq
984 aa
AA seq
DB search
MATESPIRISEAGGKWPSHMEASAYGTPPRNMGAEDLGVLLKGHRFRGSGKDAAPSRSGS
APPSMEGSFLAIENLLPLQNTQDASLTGLSRAVKNCESEEQLRADPAYLAYYNSNVNLNP
RLPPPLTSWENRHTGHRVGSSGNNWGLSSIDHRSKSSLHLPQATLSTHKEESEDDSPQQQ
AHENELVNTSGVWRRQDAASLAPQPKNMVDLIQEDFPRTMSPVYNMSLSASHRLGDKPIE
LEAGSRSSHDAHDTAVESAKSTAGADDIRVSSSVDVHTPVASSSTFEPTASMGFSNLDAA
TVASQLNTLSVSNLPNSENLSYEEKLMTSYQNNMMQRQVFAQQSYPYEVPSANSQSVNPA
YVGREQFPHNSSKLPDVQPLLQSSGFTPPLYATAAAYMASVNPFYNNMQASGPYTPQYVG
GYTLNPTAVQPYISAYPPHGAVPFVVDGATSSSYAPLTPGVSTGGNISHGAEMVHANKYL
GQFGFPVQPSFGDPIYMQYNQQPFVEGYGISGHFDPQAPRASVVQINPYDSQKRPGTGAY
LDDKKLHEQRTGASMNSRRGGLPVPNYFGHVPNTGFVMQYPGSPLPSPVLSGYPDGSPGL
SGGRNEIKPSPASGRNGGMVTGWYGPRSFDSGQDPKIVNFLEELKSGKGRRFELSDIIGH
IVEFSSDQHGSRFIQQKLESCGAEEKALVFKEVLPHASKLMTDVFGNYVIQKFFEYGNPE
QRKELAEKLAGQILPLSLQMYGCRVIQKALEVIEHEQKAQLVRELDGNIMRCVRDQNGNH
VIQKCIESIPTNKIGFILSAFRGQVANLSMHPYGCRVIQRILEHCTDEVQCQFIVDEILE
SVCSLAQDQYGNYVTQHVLERGRPQERSQIISKLSGHVVQLSQHKFASNVVEKCLEYGDA
SEREVLIVEIIAHDEQNDNLLTMMKDQFANYVIQKVIDICSENQRARLLSHIRAHANALK
KYTYGKHIVARMEHQFGENQAPSS
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagagagtccaattagaatctcagaagctggggggaaatggccttctcatatg
gaagcttcagcttatggcacaccgcctcgtaacatgggggcagaggatttgggtgtactg
ttgaagggccataggttccgtggtagtggaaaggatgcggcacccagtcgtagtggcagt
gcacctcccagcatggaaggctcatttctggccatagaaaacctattgccactgcagaac
acccaggatgcaagcttgacaggtctgagcagagctgtgaaaaattgtgaatctgaagaa
cagttacgagctgatccagcttatttggcatattacaattccaatgtcaacctaaaccct
agacttcctcccccactgacttcctgggaaaatcgccatacagggcatcgtgttggtagt
tcaggaaacaattggggactgtcttctatagatcatagaagtaaaagttctttacattta
ccgcaagcaactctttctacacacaaggaggagtctgaggatgattcaccccaacaacag
gcacatgaaaatgaattagtgaacacaagtggagtatggcggagacaggatgcagcttca
ttggcaccacagccaaaaaatatggttgatttaattcaggaagattttcctcgcacgatg
tcacctgtatataatatgtctctttctgcaagtcatcgactgggggataaaccaattgaa
ttagaagctggttccagatcttctcatgacgctcatgatactgcagtagagtctgctaaa
tctactgcaggcgcggatgatattagggtgtcatcaagtgtcgatgtccacacccctgtt
gcaagctcttcaacatttgaacccacagctagcatgggttttagtaacttagatgctgca
actgttgcatctcaattaaatacacttagtgtatctaatttgccgaattctgaaaacctg
agttatgaagaaaaattgatgaccagctaccagaacaatatgatgcaacggcaggtattc
gcgcaacaaagctatccgtatgaagttcctagtgccaattctcaaagtgtaaaccctgcc
tacgttggcagggaacagtttcctcataattcaagcaagttgcctgatgtccagccacta
cttcagtcctcagggtttacacctcccctatatgccacagctgcagcttacatggcctct
gtaaatccattttacaataatatgcaggcctcaggcccatacactcctcaatatgttggt
ggatacactttaaatcccaccgcggttcagccttatatttctgcataccctcctcatggt
gctgtaccatttgttgttgatggggctactagttctagctatgctccgctaacaccaggg
gtttcaaccgggggtaatatttcgcatggagctgaaatggtacatgcaaacaagtacctt
gggcaatttggatttcctgtacagccttcttttggcgatcctatttacatgcaatataat
cagcaaccttttgtggagggatatggtatttctggtcattttgatccacaggcacctaga
gcaagtgttgttcaaataaatccttatgattcacaaaaaaggcctggtactggtgcttat
ttggatgataaaaaattacatgaacagagaactggtgctagtatgaactcaagaagaggt
ggactgccggttcctaattattttggacatgtgccaaacacgggctttgtaatgcagtat
ccaggttcaccacttcccagtccagttttatctggatatccagatggaagtcccggcctt
tcaggaggtagaaatgaaataaaaccttccccagcttctggtagaaatggaggcatggta
actggatggtatggtccaagatcctttgacagtggtcaagaccccaagattgttaacttc
cttgaagagttgaaatctggcaaaggtcgcagatttgagctatccgatataattggacat
attgttgaatttagctctgatcagcatggaagtcgatttatacaacagaagctggaaagt
tgtggtgctgaagagaaggcattggtgttcaaagaggttcttccacatgcttctaagtta
atgactgatgtattcggtaactacgtaatacagaagtttttcgagtatggaaaccctgag
cagaggaaggaacttgcagaaaaactggctggtcagatactgcctttgagtctacagatg
tatggatgtcgtgtaatccaaaaggcactcgaggttattgagcatgaacagaaagctcag
cttgttcgtgagctggatggaaatatcatgagatgtgttcgtgaccaaaatgggaatcat
gtaatacagaagtgcattgaatcgatcccgacaaacaaaattggctttatactatctgca
tttcgtggtcaagttgctaatttatcaatgcatccttatggttgtcgagtcatccagaga
attctagagcattgtacagacgaagttcagtgtcagtttattgtggatgaaatcttggag
tcagtttgttctcttgctcaggaccagtatggtaattatgttacccagcatgtgttggag
agaggtagacctcaagaaaggagccaaattattagcaagctgtcaggacatgttgttcag
ttaagccagcataagtttgcttcgaatgttgtggagaaatgtctggagtatggtgacgcc
tctgagcgggaagtgttaattgtggagattattgcgcatgatgagcaaaatgacaattta
ttgacaatgatgaaagatcaatttgcaaattatgtgatccagaaggttattgatatctgt
tctgaaaatcagcgagcaaggttactttcacacataagagctcatgctaatgctttgaag
aaatacacttatggaaaacacattgtggctcgtatggaacatcaatttggagagaatcaa
gcacccagttcatga
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