Medicago truncatula (barrel medic): 11445708
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Entry
11445708 CDS
T01716
Name
(RefSeq) peroxisome biogenesis protein 1 isoform X1
KO
K13338
peroxin-1
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
11445708
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mtr04131
]
11445708
Membrane trafficking [BR:
mtr04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
11445708
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-1N
AAA_lid_3
AAA_16
AAA_22
AAA_5
NACHT
AAA_14
RNA_helicase
RuvB_N
Bac_DnaA
AAA_2
nSTAND3
NPHP3_N
IstB_IS21
ATPase_2
AAA_7
AAA_18
Mg_chelatase
AAA_24
AAA_25
AAA_33
TIP49
NB-ARC
ATPase
ResIII
ABC_tran
Sigma54_activat
AAA_lid_PRS2_C
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
11445708
NCBI-ProteinID:
XP_024637784
LinkDB
All DBs
Position
4:40429657..40444189
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AA seq
1130 aa
AA seq
DB search
MEFTVEAVGNIDNCFVSLPLPLIQTLQSIRDSSLLPPILALELRSPSHSPLSWFVAWSGA
TSSSSSTIQISQQFAECISLPIHSPIQVKVASNVPHASSVSIEPDTEDDWEILELNSQQA
EDQILNQIRIVHEGLRFPLRLNHHTVITFHVVSVFPKNAVVQLMPGTEVEVAPKTRKKNS
DLAGNSHVGSNSKDHTAKMLLRLQEPNELCRTSTHVKGVELHAGLTSVAFVHPETAKRFS
FNMLQLVSIVPRVSKENVSKSRRKSNIMKAKGGSAVSEVENGNTDKKEHRQAVVHLLISE
SVAKGHVMLAKSLRLYLRASLHSWVYLKACDIILEKSIPSISLCPCRFKLLRQESTVEKD
GLDDYHSHRNHIDENIHRKATSDLFLDTINWSIHSEVVAALSDESSYREEEVVANQSQNH
KGLQSLVRLWYIAHLEAITSITGIEVNSLVISSKTLLHFESSCYKIGCDEKLRLTSSENS
GNAVEMLFLLTFGEGDLNYGKLNAYEVSLGGRLSNINVDDLKIFEKIKLGDPVSIHSMEE
RASEDHINSNVSFLGWMEKTASDVIDRMLVLLSSACGLWFGSCNLPLPGHVLIYGPSGSG
KTILAMNVAKSLENRADILAHTIFVSCSKLALEKVPIIRQELANHITEALNHAPSVVIFD
DLDGIISTSDSEGSQPSMSVAGLTDFLVNIMDEYGEKRRKSCGFGPIAFIATIQSLENIP
QSLSSSGRFDFHIKLPAPAASERKAMLKHIIQRRHLQCNDDILLDVAAKCDGYDGYDLEI
LVDRTVHAAVRRFLPSNVIYEHEGPALLQEDFSQAMHDFLPVAMRDITKSVSDDGRSGWD
DVGGLVDIRNAIKEMIELPSKFPKTFAQAPLRLRSNILLYGPPGCGKTHIVGAAAAASSL
RFISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCLLFFDEFDSIAPKRGHDNTGVTDRV
VNQFLTELDGVEILAGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSWQERLEILTVL
SRKLPMANDIDLATVANMTEGFSGADLQALLSDAQLAAVHDILDNIDTSRSERTPVITDA
LLKLTASKTRPSVSEEEKRRLYNVYRQFLDSKRSVAAQSRDIKGKKATLA
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atggagttcacagttgaagcggtgggaaacatagacaactgtttcgtatctctcccctta
cctctaatccaaactcttcaatccatacgagactcatctcttcttccaccaatcctcgct
ctcgagcttcgttctccctctcactctcctctctcctggtttgttgcttggtccggcgcc
acttcttcttcctcttcaaccatacaaatctctcaacaattcgctgaatgcatttctcta
ccaattcattctccaattcaagttaaagtcgcttctaacgtccctcatgcttcttccgtt
tctattgagccggataccgaggatgattgggagattttggaacttaattctcaacaagct
gaggatcaaattctcaatcagattaggattgttcatgaagggctgaggtttcctttgcgg
ttgaatcatcacactgtcatcacatttcacgttgtttctgtttttcccaagaatgcggtg
gtacaactcatgcccggaactgaagttgaggttgctccaaagacgcgcaaaaaaaattcg
gatttagctggaaattcacatgtaggttccaatagtaaagatcatactgcaaagatgctg
ctccgtttacaagaaccaaatgagttatgtcgtaccagtactcatgtcaaaggtgttgag
cttcatgcagggcttacttctgttgcttttgttcatccagaaacagccaagcgcttctca
tttaacatgcttcagttggtttccatagtaccaagagtatccaaagaaaatgttagtaaa
tccagaagaaaatccaatattatgaaagccaaaggtggttcagctgttagtgaagttgag
aatggaaacacggacaagaaggaacatcgacaagcagttgttcatctgttgatttcagaa
tccgtggctaaaggacatgtaatgctagctaagtctcttcgcctttatttgagagctagc
ctgcattcatgggtttatttgaaggcatgtgatattattttggaaaaaagtattccttct
atttctctctgtccttgtcgattcaaactgttaaggcaagagagtactgttgagaaagat
ggtctagatgattatcacagccacaggaatcacattgatgaaaacatacatagaaaagct
acttctgatctctttttggataccattaattggtcgatccacagtgaagttgttgcggct
ctttctgatgaatctagttacagagaagaggaagtggttgcaaaccaatctcagaatcat
aagggattacaaagtcttgtacgactatggtatattgcgcaccttgaggcaattacttcc
attacggggatagaagttaattcattggttatcagtagtaaaaccttgcttcattttgaa
tcaagctgttacaagattgggtgcgatgagaagcttcggctgacttcttcagaaaacagt
ggcaatgcagttgaaatgttatttttattgacctttggtgaaggagatctgaattatgga
aaacttaatgcatatgaagtttctcttggaggaagactcagtaacatcaacgtcgatgat
ctgaagatttttgaaaaaataaaattgggtgatccagtttctattcattctatggaagag
agagcctctgaagaccacattaattctaatgtatctttccttggctggatggagaaaact
gcttctgatgttatcgataggatgttggtattgttatcttcagcatgtggtttgtggttt
ggctcatgcaacctgccacttcctggacatgttctgatatatggaccttcgggctctggg
aaaactatactagcaatgaatgtggcaaaatcccttgagaatcgtgcagacatcttagca
cacacaatttttgtttcctgctcaaaacttgctttggagaaggtcccaattattcgccaa
gaacttgcaaaccatataactgaagctttaaaccatgcaccttctgttgtcatatttgat
gatcttgatggtataatttctacctctgattccgaaggatctcagccatcaatgtctgtt
gctggactcactgactttctggtcaacatcatggatgaatatggggagaagagacgaaaa
tcatgtggatttggaccaatagccttcatagctaccatacagtccctagagaatatacca
caatctttgagctcttcaggacggtttgactttcacattaagctgcctgctcctgccgct
tctgagcgcaaggctatgttgaagcatataatacaaaggcgacacctgcaatgcaatgat
gacatcctgcttgatgtggctgcaaaatgtgatggttatgatggctatgatttggaaata
ttagttgacagaactgttcatgccgctgttcgccgttttctgccatctaatgtcatttat
gagcacgagggccctgcattactacaggaggatttctctcaggcaatgcacgattttctt
ccagttgcaatgcgcgatatcacaaaatctgtttctgatgatggccgttctggatgggac
gatgtcggtggtcttgttgatattcgaaatgctattaaagagatgattgagttgccatca
aagtttccaaaaacttttgcacaagcaccattaaggttgcggtcaaatatccttctatat
ggtcctcctggttgtggcaaaactcacatagtcggtgcagctgcggccgcttcttcactt
agattcatatcagtgaaagggccagaactgttaaacaaatacattggtgcttctgaacaa
gctgttagggatatattctctaaagcagcagctgcagcaccgtgcctgcttttttttgat
gaatttgattctattgctcccaagagagggcacgataatactggagtaactgatcgtgtt
gttaatcaatttttgactgagttagacggtgttgagattttagctggtgtatttgtgttc
gctgcaaccagtagaccagatttacttgatgctgcactcttgagaccgggtaggttagat
cgtcttctattttgtgactttccatcttggcaggagagattggaaattcttacggtactt
tctagaaagttaccaatggccaatgatattgatttggctacagtagctaatatgactgag
gggttcagtggagctgatcttcaagctctcctctcagacgcgcaacttgcagcagttcat
gatatccttgacaatattgatacgtctaggtcggagagaacaccagttattactgatgct
cttctaaagctcactgcatccaagaccagaccatctgtttcagaggaagagaaaagacga
ctctacaatgtttatcgccaattcctggattcaaagagatctgttgctgcccagtcaagg
gatattaaaggcaagaaggcaactcttgcgtga
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